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Fig 1.

Location of the 45 sample station around Moorea, French Polynesia (for details see Table 1).

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Table 1.

Sample sites showing location, depth, calculated Fisher α indices, FORAM—Index (FI) values, and total number of genera and species recorded in individual environments.

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Table 2.

Generic categorization of functional groups of foraminifera based on ecological preferences in warm water environments [31,64,65].

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Fig 2.

Scanning electron micrographs of selected species of indicator foraminifera characterizing the major cluster habitats around Moorea Island.

Species that bear symbionts: 1. Coscinospira hemprichii Ehrenberg; 2. Peneroplis pertusus Forskål; 3. Borelis schlumbergeri Reichel; 4, 5. Amphisorus hemprichii Ehrenberg (Scale bar is 200μm); 6, 7. Sorites orbiculus Ehrenberg; 8, 9. Parasorites orbitolitoides Hofker; 10. Monalysidium confusa McCulloch; 11. Assilina (Operculina) ammonoides Schröter; 12. Amphistegina lessonii d’Orbigny; 13. Heterostegina depressa, d’Orbigny; Species associated with the symbiont-bearing taxa: 14. Schlumbergerina alveoliniformis Brady; 15. Anomalinella rostrata Brady; 16. Eponides repandus Fitchel and Moll; Opportunistic species: 17. Ammonia tepida Cushman; 18. Bolivina striatula Cushman 19. Bolivinella elegans Parr; 20. Bulimina sp. 1 (Scale bar is 50μm); 21. Buliminella elegantissima d’Orbigny; 22. Elongobula spicata Cushman and Parker; 23. Elphidium oceanicum Cushman; 24. Fursenkoina schreibersiana Czjzek; 25. Hopkinsina pacifica, Cushman; 26. Loxostomina limbata, Brady; 27. Nonionoides grateloupi d’Orbigny; 28. Reusella pacifica Cushman and McCulloch; 29. Sigmavirgulina tortuosa Brady; 30. Trifarina bradyi Cushman; Heterotrophic species: 31. Sagrinella convallaria, Millett; 32. Wiesnerella auriculata Egger; 33. Quinqueloculina cf. Q. semireticulosa Cushman; 34. Quinqueloculina funafutiensis, Chapman; 35. Quinqueloculina exsculpta Heron-Allen and Earland; 36. Quinqueloculina eburnea d’Orbigny; 37. Quinqueloculina cuvieriana d’Orbigny. Scale bar is 100μm for all magnifications.

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Fig 3.

Abundance records of larger symbiont-bearing (LBF), Opportunistic (OPP) and Heterotrophic (HET) foraminifera within a) Opunohu and b) Cook’s Bay.

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Fig 4.

Increase in Fisher α diversity indices from the bays to the back-reef habitats.

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Fig 5.

Q-mode cluster diagram of sample sites exhibiting the presence of 6 major cluster groups.

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Fig 6.

Map showing locations of the clusters stations.

The symbols represent the clusters defined in Fig 5.

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Table 3.

Abundance records of selected genera of benthic foraminifera included in the Principal Component Analyses (PCA).

Amm, Ammonia; Amp, Amphistegina; Bol, Bolivina; Elph, Elphidium; Hau, Hauerina; Hom, Homotrema; Mil, Miliolinella; Pen, Peneroplis; Quin, Quinqueloculina; Schl, Schlumbergerina; Sor, Sorites; Tex, Textularia; Tri, Triloculina.

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Fig 7.

Principal Component Analysis (PCA) of the foraminiferafauna showing a) principal components 1 and 2, and b) principalcomponents 1 and 3.

The symbols represent the clusters as defined in Fig 5.

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Fig 8.

Ternary diagram showing percent abundances of wall structural types (porcellaneous, hyaline-perforate and agglutinated foraminifera) of individual sample sites around Moorea [55].

The symbols represent the clusters groups as defined in Fig 5.

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Fig 9.

FI values plotted along transects in Opunohu and Cook’s Bays showing indices rising from the innermost bays towards the reefal sites.

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