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The Family Alteromonadaceae

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The Prokaryotes

Abstract

The family Alteromonadaceae collects a diverse set of gammaproteobacteria, mostly marine in origin and requiring sodium to grow. The type genus Alteromonas was among the first marine bacteria described. They have large cells that grow quite fast with minimal nutritional requirements, and although all are obligate aerobic heterotrophs, they display a diverse set of potential substrates and extensive degradative properties. They have large genomes that contain several degradative genes and sometimes secondary metabolites. Ecologically they are often associated to nutrient-rich environments such as particulate material, marine snow, or marine animals. They have relatively high optimal growth temperatures for marine bacteria except for those isolated from cold environments such as Glaciecola. Saccharophagus has been shown to utilize a large set of sugars and polysaccharides as carbon and energy source. Members of Marinobacter have been described as hydrocarbon degrading, although this characteristic is spread among other genera of the family. Some are agarolytic (Agarivorans, Aliagarivorans). Some strains of Alteromonas macleodii have the most oxygen-resistant hydrogenase described to date although this species cannot grow on hydrogen as energy source and does not fix CO2.

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References

  • Acinas SG, Antón J et al (1999) Diversity of free-living and attached bacteria in offshore Western Mediterranean waters as depicted by analysis of genes encoding 16S rRNA. Appl Environ Microbiol 65:514–522

    PubMed  CAS  PubMed Central  Google Scholar 

  • Agogué H, Casamayor EO et al (2004) Comparison of samplers for the biological characterization of the sea surface microlayer. Limnol Oceanogr Methods 2:213–225

    Google Scholar 

  • Aguilera M, Jiménez-Pranteda ML et al (2009) Marinobacter lacisalsi sp. nov., a moderately halophilic bacterium isolated from the saline-wetland wildfowl reserve Fuente de Piedra in southern Spain. Int J Syst Evol Microbiol 59(7):1691–1695

    PubMed  CAS  Google Scholar 

  • Akagawa-Matsushita M, Matsuo M et al (1992) Alteromonas atlantica sp. nov. and Alteromonas carrageenovora sp. nov., bacteria that decompose algal polysaccharides. Int J Syst Bacteriol 42(4):621–627

    CAS  Google Scholar 

  • Andrykovitch G, Marx I (1988) Isolation of a new polysaccharide-digesting bacterium from a salt marsh. Appl Environ Microbiol 54(4):1061–1062

    PubMed  CAS  PubMed Central  Google Scholar 

  • Antunes A, França L et al (2007) Marinobacter salsuginis sp. nov., isolated from the brine–seawater interface of the Shaban Deep, Red Sea. Int J Syst Evol Microbiol 57(5):1035–1040

    PubMed  CAS  Google Scholar 

  • Baba A, Miyazaki M et al (2011) Microbulbifer chitinilyticus sp. nov. and Microbulbifer okinawensis sp. nov., chitin-degrading bacteria isolated from mangrove forests. Int J Syst Evol Microbiol 61(9):2215–2220

    PubMed  CAS  Google Scholar 

  • Baik KS, Park YD et al (2006) Glaciecola nitratireducens sp. nov., isolated from seawater. Int J Syst Evol Microbiol 56(9):2185–2188

    PubMed  CAS  Google Scholar 

  • Baumann L, Baumann P et al (1972) Taxonomy of aerobic marine eubacteria. J Bacteriol 110(1):402–429

    PubMed  CAS  PubMed Central  Google Scholar 

  • Baumann P, Baumann L et al (1984) Taxonomy of Alteromonas: A. nigrifaciens sp. nov., nom. rev.; A. macleodii; and A. haloplanktis. Int J Syst Bacteriol 34:145–149

    Google Scholar 

  • Bein SJ (1954) A study of certain chromogenic bacteria isolated from red tide water with a description of a new species. Bull Marine Sci 4(2):110–119

    Google Scholar 

  • Bian F, Qin QL et al (2011) Complete genome sequence of seawater bacterium Glaciecola nitratireducens FR1064T. J Bacteriol 193(24):7006–7007

    PubMed  CAS  PubMed Central  Google Scholar 

  • Bowman JP, McCammon SA et al (1998) Glaciecola punicea gen. nov., sp. nov. and Glaciecola pallidula gen. nov., sp. nov.: psychrophilic bacteria from Antarctic sea-ice habitats. Int J Syst Bacteriol 48(4):1213–1222

    Google Scholar 

  • Bozzi L, Milas M et al (1996) Characterization and solution properties of a new exopolysaccharide excreted by the bacterium Alteromonas sp. strain 1644. Int J Biol Macromol 18(1):9–17

    PubMed  CAS  Google Scholar 

  • Buck JD, Meyers SP et al (1963) Pseudomonas (Flavobacterium) piscicida bein comb. nov. J Bacteriol 86(5):1125–1126

    PubMed  CAS  PubMed Central  Google Scholar 

  • Chang HW, Nam YD et al (2007) Marinobacterium halophilum sp. nov., a marine bacterium isolated from the Yellow Sea. Int J Syst Evol Microbiol 57(1):77–80

    PubMed  CAS  Google Scholar 

  • Chen LP, Xu HY et al (2009a) Glaciecola lipolytica sp. nov., isolated from seawater near Tianjin city, China. Int J Syst Evol Microbiol 59(1):73–76

    PubMed  CAS  Google Scholar 

  • Chen YG, Xiao HD et al (2009b) Alteromonas halophila sp. nov., a new moderately halophilic bacterium isolated from a sea anemone. Antonie Van Leeuwenhoek 96(3):259–266

    PubMed  CAS  Google Scholar 

  • Chiu HH, Shieh WY et al (2007) Alteromonas tagae sp. nov. and Alteromonas simiduii sp. nov., mercury-resistant bacteria isolated from a Taiwanese estuary. Int J Syst Evol Microbiol 57(6):1209–1216

    PubMed  CAS  Google Scholar 

  • Cho JY (2012) Algicidal activity of marine alteromonas sp. KNS-16 and isolation of active compounds. Biosci Biotechnol Biochem 76(8):1452–1458

    PubMed  CAS  Google Scholar 

  • Coyne VE, Pillidge CJ et al (1989) Reclassification of Alteromonas colwelliana to the genus Shewanella by DNA-DNA hybridization, serology and 5S ribosomal RNA sequence data. Syst Appl Microbiol 12:275–279

    Google Scholar 

  • Du ZJ, Lv GQ et al (2011) Agarivorans gilvus sp. nov. isolated from seaweed. Int J Syst Evol Microbiol 61(3):493–496

    PubMed  CAS  Google Scholar 

  • Duckworth M, Turvey JR (1969) The action of a bacterial agarase on agarose, porphyran and alkali-treated porphyran. Biochem J 113(4):687–692

    PubMed  CAS  PubMed Central  Google Scholar 

  • Ekborg NA, Gonzalez JM et al (2005) Saccharophagus degradans gen. nov., sp. nov., a versatile marine degrader of complex polysaccharides. Int J Syst Evol Microbiol 55(4):1545–1549

    PubMed  CAS  Google Scholar 

  • Ekborg NA, Taylor LE et al (2006) Genomic and proteomic analyses of the agarolytic system expressed by Saccharophagus degradans 2–40. Appl Environ Microbiol 72(5):3396–3405

    PubMed  CAS  PubMed Central  Google Scholar 

  • Enger Ø, Nygaard H et al (1987) Characterization of Alteromonas denitrificans sp. nov. Int J Syst Bacteriol 37(4):416–421

    Google Scholar 

  • Euzéby JP, Tindall BJ (2004) Status of strains that contravene Rules 27(3) and 30 of the Bacteriological Code. Request for an Opinion. Int J Syst Evol Microbiol 54(1):293–301

    PubMed  Google Scholar 

  • Gao X, Hall DG (2005) Catalytic asymmetric synthesis of a potent thiomarinol antibiotic. J Am Chem Soc 127(6):1628–1629

    PubMed  CAS  Google Scholar 

  • Garcia-Martinez J, Acinas SG et al (2002) Prevalence and microdiversity of Alteromonas macleodii-like microorganisms in different oceanic regions. Environ Microbiol 4(1):42–50

    PubMed  CAS  Google Scholar 

  • Gärdes A, Kaeppel EC et al (2010) Complete genome sequence of Marinobacter adhaerens type strain (HP15), a diatom-interacting marine microorganism. Stand Genomic Sci 3(2):97–107

    PubMed  PubMed Central  Google Scholar 

  • Gauthier G, Gauthier M et al (1995) Phylogenetic analysis of the genera Alteromonas, Shewanella, and Moritella using genes coding for small-subunit rRNA sequences and division of the genus Alteromonas into two genera, Alteromonas (emended) and Pseudoalteromonas gen. nov., and proposal of twelve new species combinations. Int J Syst Baceriol 45(4):755–761

    CAS  Google Scholar 

  • Gauthier MJ, Breittmayer VA (1992) The genera Alteromonas and Marinomonas. In: Balows A, Truper HG, Dworkin M, Harber H, Schleifer KH (eds) The Prokaryotes, vol 3, 2nd edn. Springer-Verlag, Berlin, Germany, pp 3064–3070

    Google Scholar 

  • Gauthier MJ, Lafay B et al (1992) Marinobacter hydrocarbonoclasticus gen. nov., sp. nov., a new, extremely halotolerant, hydrocarbon-degrading marine bacterium. Int J Syst Bacteriol 42(4):568–576

    PubMed  CAS  Google Scholar 

  • González JM, Mayer F et al (1997) Microbulbifer hydrolyticus gen. nov., sp. nov., and Marinobacterium georgiense gen. nov., sp. nov., two marine bacteria from a lignin-rich pulp mill waste enrichment community. Int J Syst Bacteriol 47(2):369–376

    PubMed  Google Scholar 

  • Gooday GW (1990) The ecology of chitin degradation. ETATS-UNIS, Plenum, New York

    Google Scholar 

  • Gorshkova NM, Ivanova EP et al (2003) Marinobacter excellens sp. nov., isolated from sediments of the Sea of Japan. Int J Syst Evol Microbiol 53(6):2073–2078

    PubMed  CAS  Google Scholar 

  • Gram L, Trolle G et al (1987) Detection of specific spoilage bacteria from fish stored at low (0 °C) and high (20 °C) temperatures. Int J Food Microbiol 4(1):65–72

    Google Scholar 

  • Green DH, Bowman JP et al (2006) Marinobacter algicola sp. nov., isolated from laboratory cultures of paralytic shellfish toxin-producing dinoflagellates. Int J Syst Evol Microbiol 56(3):523–527

    PubMed  CAS  Google Scholar 

  • Gu J, Cai H et al (2007) Marinobacter gudaonensis sp. nov., isolated from an oil-polluted saline soil in a Chinese oilfield. Int J Syst Evol Microbiol 57(2):250–254

    PubMed  CAS  Google Scholar 

  • Guezennec J, Pignet P et al (1998) Sulfation and depolymerization of a bacterial exopolysaccharide of hydrothermal origin. Carbohydr Polym 37(1):19–24

    CAS  Google Scholar 

  • Guo B, Gu J et al (2007) Marinobacter segnicrescens sp. nov., a moderate halophile isolated from benthic sediment of the South China Sea. Int J Syst Evol Microbiol 57(9):1970–1974

    PubMed  CAS  Google Scholar 

  • Handley KM, Héry M et al (2009) Marinobacter santoriniensis sp. nov., an arsenate-respiring and arsenite-oxidizing bacterium isolated from hydrothermal sediment. Int J Syst Evol Microbiol 59(4):886–892

    PubMed  CAS  Google Scholar 

  • Horvath P, Barrangou R (2010) CRISPR/Cas, the immune system of bacteria and archaea. Science 327(5962):167–170

    PubMed  CAS  Google Scholar 

  • Huo YY, Wang CS et al (2008) Marinobacter mobilis sp. nov. and Marinobacter zhejiangensis sp. nov., halophilic bacteria isolated from the East China Sea. Int J Syst Evol Microbiol 58(12):2885–2889

    PubMed  CAS  Google Scholar 

  • Huo YY, Xu XW et al (2009) Marinobacterium nitratireducens sp. nov. and Marinobacterium sediminicola sp. nov., isolated from marine sediment. Int J Syst Evol Microbiol 59(5):1173–1178

    PubMed  CAS  Google Scholar 

  • Huu NB, Denner EBM et al (1999) Marinobacter aquaeolei sp. nov., a halophilic bacterium isolated from a Vietnamese oil-producing well. Int J Syst Bacteriol 49(2):367–375

    PubMed  CAS  Google Scholar 

  • Ivanova EP, Chun J et al (2000) Reclassification of Alteromonas distincta Romanenko et al. 1995 as Pseudoalteromona distincta comb. nov. Int J Syst Evol Microbiol 50:141–144

    Google Scholar 

  • Ivanova EP, Romanenko LA et al (2001) Retrieval of the species Alteromonas tetraodonis Simidu et al. 1990 as Pseudoalteromonas tetraodonis comb. nov. and emendation of description. Int J Syst Evol Microbiol 51:1071–1078

    Google Scholar 

  • Ivanova EP, Mikhailov VV (2001) A new family, Alteromonadaceae fam. nov., including marine proteobacteria of the genera alteromonas, pseudoalteromonas, idiomarina, and colwellia. Microbiology 70(1):10–17

    CAS  Google Scholar 

  • Ivanova EP, Mikhailov VV et al (1996) Alteromonas elyakovii sp. nov., a novel bacterium isolated from marine molluscs. Biol Morya 22:231–237

    Google Scholar 

  • Ivanova EP, Flavier S et al (2004) Phylogenetic relationships among marine Alteromonas-like proteobacteria: emended description of the family Alteromonadaceae and proposal of Pseudoalteromonadaceae fam. nov., Colwelliaceae fam. nov., Shewanellaceae fam. nov., Moritellaceae fam. nov., Ferrimonadaceae fam. nov., Idiomarinaceae fam. nov. and Psychromonadaceae fam. nov. Int J Syst Evol Microbiol 54(5):1773–1788

    PubMed  CAS  Google Scholar 

  • Ivanova EP, Bowman JP et al (2005) Alteromonas addita sp. nov. Int J Syst Evol Microbiol 55(3):1065–1068

    PubMed  CAS  Google Scholar 

  • Ivars-Martinez E, D´Auria G et al. (2008a) Biogeography of the ubiquitous marine bacterium Alteromonas macleodii determined by multi-locus sequence analysis (MLSA). Mol Ecol 17(18):4092–4106

    PubMed  CAS  Google Scholar 

  • Ivars-Martinez E, Martin-Cuadrado AB et al (2008b) Comparative genomics of two ecotypes of the marine planktonic copiotroph Alteromonas macleodii suggests alternative lifestyles associated with different kinds of particulate organic matter. ISME J 2(12):1194–1212

    PubMed  CAS  Google Scholar 

  • Iwamoto Y, Araki R et al (2001) Purification and characterization of bifunctionalalginate lyase from Alteromonas sp. strain no. 272 and its action on saturated oligomeric substrates. Biosci Biotechnol Biochem 65(1):133–142

    PubMed  CAS  Google Scholar 

  • Jean WD, Chen JS et al (2006) Bowmanella denitrificans gen. nov., sp. nov., a denitrifying bacterium isolated from seawater from An-Ping Harbour, Taiwan. Int J Syst Evol Microbiol 56(10):2463–2467

    PubMed  CAS  Google Scholar 

  • Jean WD, Huang SP et al (2009) Aliagarivorans marinus gen. nov., sp. nov. and Aliagarivorans taiwanensis sp. nov., facultatively anaerobic marine bacteria capable of agar degradation. Int J Syst Evol Microbiol 59(8):1880–1887

    PubMed  CAS  Google Scholar 

  • Jensen M, Tebo B et al (1980) Characterization of Alteromonas hanedai (sp. nov.), a nonfermentative luminous species of marine origin. Curr Microbiol 3(5):311–315

    Google Scholar 

  • Jeon CO, Lim J-M et al (2005) Salinimonas chungwhensis gen. nov., sp. nov., a moderately halophilic bacterium from a solar saltern in Korea. Int J Syst Evol Microbiol 55(1):239–243

    PubMed  CAS  Google Scholar 

  • Jin HM, Jeong H et al (2011) Complete genome sequence of the polycyclic aromatic hydrocarbon-degrading bacterium Alteromonas sp. strain SN2. J Bacteriol 193(16):4292–4293

    PubMed  CAS  PubMed Central  Google Scholar 

  • Jung J, Chun J et al (2012) Genome sequence of extracellular-protease-producing Alishewanella jeotgali isolated from traditional Korean fermented seafood. J Bacteriol 194(8):2097

    PubMed  CAS  PubMed Central  Google Scholar 

  • Kim H, Choo YJ et al (2007) Marinobacterium litorale sp. nov. in the order Oceanospirillales. Int J Syst Evol Microbiol 57(7):1659–1662

    PubMed  CAS  Google Scholar 

  • Kim YG, Jin YA et al (2008) Marinobacterium rhizophilum sp. nov., isolated from the rhizosphere of the coastal tidal-flat plant Suaeda japonica. Int J Syst Evol Microbiol 58(1):164–167

    PubMed  CAS  Google Scholar 

  • Kim MS, Roh SW et al (2009) Alishewanella jeotgali sp. nov., isolated from traditional fermented food, and emended description of the genus Alishewanella. Int J Syst Evol Microbiol 59(9):2313–2316

    PubMed  CAS  Google Scholar 

  • Kim MS, Jo SK et al (2010) Alishewanella agri sp. nov., isolated from landfill soil. Int J Syst Evol Microbiol 60(9):2199–2203

    PubMed  CAS  Google Scholar 

  • Kim J, Jung J et al (2012) Genome sequence of pectin-degrading Alishewanella agri, isolated from landfill soil. J Bacteriol 194(18):5135–5136

    PubMed  CAS  PubMed Central  Google Scholar 

  • Klippel B, Lochner A et al (2011) Complete genome sequence of the marine cellulose- and xylan-degrading bacterium Glaciecolasp. strain 4H-3-7 + YE-5. J Bacteriol 193(17):4547–4548

    PubMed  CAS  PubMed Central  Google Scholar 

  • Klochko VV, Zelena BL et al (2012) Peculiarities of Alteromonas macleodii strains reflects their deep/surface habitation rather than geographical distribution. J Gen Appl Microbiol 58(2):129–135

    PubMed  CAS  Google Scholar 

  • Kodama K, Shiozawa H, Ishii A (1993) Alteromonas rava sp. nov., a marine bacterium that produces a new antibiotic, thiomarinol. Annu Rep Sankyo Res Lab 45:131–136

    CAS  Google Scholar 

  • Kolekar YM, Kodam KM (2012) Decolorization of textile dyes by Alishewanella sp. KMK6. Appl Microbiol Biotechnol 95(2):521–529

    PubMed  CAS  Google Scholar 

  • Kurahashi M, Yokota A (2004) Agarivorans albus gen. nov., sp. nov., a γ-proteobacterium isolated from marine animals. Int J Syst Evol Microbiol 54(3):693–697

    PubMed  CAS  Google Scholar 

  • Lai Q, Yuan J et al (2009) Bowmanella pacifica sp. nov., isolated from a pyrene-degrading consortium. Int J Syst Evol Microbiol 59(7):1579–1582

    PubMed  CAS  Google Scholar 

  • Lee B-K, Katano T et al (2008) Monitoring of algicidal bacterium, Alteromonas sp. Strain A14 in its application to natural Cochlodinium polykrikoides blooming seawater using fluorescence in situ hybridization. J Microbiol 46(3):274–282

    PubMed  CAS  Google Scholar 

  • Leon O, Quintana L et al (1992) Purification and properties of an extracellular agarase from Alteromonas sp. strain C-1. Appl Environ Microbiol 58(12):4060–4063

    PubMed  CAS  PubMed Central  Google Scholar 

  • Li AX, Guo LZ et al (2012) Alkaline inulinase production by a newly isolated bacterium Marinimicrobium sp. LS-A18 and inulin hydrolysis by the enzyme. World J Microbiol Biotechnol 28(1):81–89

    PubMed  Google Scholar 

  • Liebgott PP, Casalot L et al (2006) Marinobacter vinifirmus sp. nov., a moderately halophilic bacterium isolated from a wine-barrel-decalcification wastewater. Int J Syst Evol Microbiol 56(11):2511–2516

    PubMed  CAS  Google Scholar 

  • Lim JM, Jeon CO et al (2006) Marinimicrobium koreense gen. nov., sp. nov. and Marinimicrobium agarilyticum sp. nov., novel moderately halotolerant bacteria isolated from tidal flat sediment in Korea. Int J Syst Evol Microbiol 56(3):653–657

    PubMed  CAS  Google Scholar 

  • Long M, Yu Z et al (2010) A Novel β-Agarase with high pH stability from marine Agarivorans sp. LQ48. Marine Biotechnol 12(1):62–69

    CAS  Google Scholar 

  • Lucena T, Pascual J et al (2010) Haliea mediterranea sp. nov., a marine gammaproteobacterium. Int J Syst Evol Microbiol 60(8):1844–1848

    PubMed  CAS  Google Scholar 

  • Lyman J, Fleming RH (1940) Composition of sea water. J Mar Res 3:134–146

    CAS  Google Scholar 

  • MacDonell MT, Colwell RR (1985) Phylogeny of the Vibrionaceae, and recommendation for two new Genera, Listonella and Shewanella. Syst Appl Microbiol 6(2):171–182

    CAS  Google Scholar 

  • Martín S, Márquez MC et al (2003) Marinobacter lipolyticus sp. nov., a novel moderate halophile with lipolytic activity. Int J Syst Evol Microbiol 53(5):1383–1387

    PubMed  Google Scholar 

  • Martin-Cuadrado AB, Lopez-Garcia P et al (2007) Metagenomics of the deep Mediterranean, a warm bathypelagic habitat. PLoS One 2(9):e914

    PubMed  PubMed Central  Google Scholar 

  • Martínez-Checa F, Béjar V et al (2005) Alteromonas hispanica sp. nov., a polyunsaturated-fatty-acid-producing, halophilic bacterium isolated from Fuente de Piedra, southern Spain. Int J Syst Evol Microbiol 55(6):2385–2390

    PubMed  Google Scholar 

  • Math RK, Jin HM et al (2012) Comparative genomics reveals adaptation by Alteromonas sp. SN2 to marine tidal-flat conditions: cold tolerance and aromatic hydrocarbon metabolism. PLoS One 7(4):e35784

    PubMed  CAS  PubMed Central  Google Scholar 

  • Matsuyama H, Hirabayashi T et al (2006) Glaciecola chathamensis sp. nov., a novel marine polysaccharide-producing bacterium. Int J Syst Evol Microbiol 56(12):2883–2886

    PubMed  CAS  Google Scholar 

  • McCarren J, Becker JW et al (2010) Microbial community transcriptomes reveal microbes and metabolic pathways associated with dissolved organic matter turnover in the sea. Proc Natl Acad Sci USA 107(38):16420–16427

    PubMed  CAS  PubMed Central  Google Scholar 

  • Miyazaki M, Nogi Y et al (2008) Microbulbifer agarilyticus sp. nov. and Microbulbifer thermotolerans sp. nov., agar-degrading bacteria isolated from deep-sea sediment. Int J Syst Evol Microbiol 58(5):1128–1133

    PubMed  CAS  Google Scholar 

  • Moller M, Kjeldsen K et al (2010) Marinimicrobium haloxylanilyticum sp. nov., a new moderately halophilic, polysaccharide-degrading bacterium isolated from Great Salt Lake, Utah. Antonie Van Leeuwenhoek 98(4):553–565

    PubMed  CAS  Google Scholar 

  • Montes MJ, Bozal N et al (2008) Marinobacter guineae sp. nov., a novel moderately halophilic bacterium from an Antarctic environment. Int J Syst Evol Microbiol 58(6):1346–1349

    PubMed  CAS  Google Scholar 

  • Newton RJ, Griffin LE et al (2010) Genome characteristics of a generalist marine bacterial lineage. ISME J 4(6):784–798

    PubMed  CAS  Google Scholar 

  • Nishijima M, Takadera T et al (2009) Microbulbifer variabilis sp. nov. and Microbulbifer epialgicus sp. nov., isolated from Pacific marine algae, possess a rod–coccus cell cycle in association with the growth phase. Int J Syst Evol Microbiol 59(7):1696–1707

    PubMed  CAS  Google Scholar 

  • Orikoshi H, Nakayama S et al (2005) Roles of four chitinases (ChiA, ChiB, ChiC, and ChiD) in the chitin degradation system of marine bacterium Alteromonas sp. strain O-7. Appl Environ Microbiol 71(4):1811–1815

    PubMed  CAS  PubMed Central  Google Scholar 

  • Pukall R, Pauker O et al (1999) High sequence diversity of Alterornonas rnacleodii-related cloned and celular 16s rDNAs from a Mediterranean Sea-water mesocosm experiment. FEMS Microbiol Ecol 28:335–344

    CAS  Google Scholar 

  • Qin QL, Xie BB et al (2012) Genome sequence of proteorhodopsin-containing sea ice bacterium glaciecola punicea ACAM 611 T. J Bacteriol 194(12):3267

    PubMed  CAS  PubMed Central  Google Scholar 

  • Quaiser A, Zivanovic Y et al (2011) Comparative metagenomics of bathypelagic plankton and bottom sediment from the Sea of Marmara. ISME J 5(2):285–304

    PubMed  CAS  PubMed Central  Google Scholar 

  • Quévrain E, Domart-Coulon I et al (2009) Novel natural parabens produced by a Microbulbifer bacterium in its calcareous sponge host Leuconia nivea. Environ Microbiol 11(6):1527–1539

    PubMed  Google Scholar 

  • Reichelt JL, Baumann P (1973) Change of the name Alteromonas marinopraesens (ZoBell and Upham) Baumann et al. to Alteromonas haloplanktis (ZoBell and Upham) comb. nov. and assignment of strain ATCC 23821 (Pseudomonas enalia) and strain c-A1 of De Voe and Oginsky to this species. Int J Syst Bacteriol 23(4):438–441

    Google Scholar 

  • Riquelme C, Araya R et al (1997) Potential probiotic strains in the culture of the Chilean scallop Argopecten purpuratus (Lamarck, 1819). Aquaculture 154(1):17–26

    Google Scholar 

  • Roh SW, Quan ZX et al (2008) Marinobacter goseongensis sp. nov., from seawater. Int J Syst Evol Microbiol 58(12):2866–2870

    PubMed  CAS  Google Scholar 

  • Roh SW, Nam Y-D et al (2009) Alishewanella aestuarii sp. nov., isolated from tidal flat sediment, and emended description of the genus Alishewanella. Int J Syst Evol Microbiol 59(2):421–424

    PubMed  CAS  Google Scholar 

  • Romanenko LA, Lysenko AM, Mikhailov VV, Kurika AV (1994) A novel species of brown-pigmented agarolytic bacteria of the genus Alteromonas. Mikrobiologiya 63:1081–1087

    CAS  Google Scholar 

  • Romanenko LA, Mikhailov VV et al (1995) A novel species of melanin-synthesizing bacteria of the genus Alteromonas. Mikrobiologiya 64:74–77

    CAS  Google Scholar 

  • Romanenko LA, Zhukova NV et al (2003) Glaciecola mesophila sp. nov., a novel marine agar-digesting bacterium. Int J Syst Evol Microbiol 53(3):647–651

    PubMed  CAS  Google Scholar 

  • Romanenko LA, Schumann P et al (2005) Marinobacter bryozoorum sp. nov. and Marinobacter sediminum sp. nov., novel bacteria from the marine environment. Int J Syst Evol Microbiol 55(1):143–148

    PubMed  CAS  Google Scholar 

  • Romera-Castillo C, Sarmento H et al (2011) Net production and consumption of fluorescent colored dissolved organic matter by natural bacterial assemblages growing on marine phytoplankton exudates. Appl Environ Microbiol 77(21):7490–7498

    PubMed  CAS  PubMed Central  Google Scholar 

  • Satomi M, Kimura B et al (2002) Phylogenetic study of the genus Oceanospirillum based on 16S rRNA and gyrB genes: emended description of the genus Oceanospirillum, description of Pseudospirillum gen. nov., Oceanobacter gen. nov. and Terasakiella gen. nov. and transfer of Oceanospirillum jannaschii and Pseudomonas stanieri to Marinobacterium as Marinobacterium jannaschii comb. nov. and Marinobacterium stanieri comb. no. Int J Syst Evol Microbiol 52(3):739–747

    PubMed  CAS  Google Scholar 

  • Sawabe T, Ohtsuka M et al (1997) Novel alginate lyases from marine bacterium Alteromonas sp. strain H-4. Carbohydr Res 304(1):69–76

    PubMed  CAS  Google Scholar 

  • Sawabe T, Ohtsuka M et al (1998) ChemInform abstract: novel alginate lyases from marine bacterium Alteromonas sp. strain H-4. ChemInform 29(7)

    Google Scholar 

  • Sawabe T, Tanaka R et al (2000) Assignment of Alteromonas elyakovii KMM 162 T and five strains isolated from spot-wounded fronds of Laminaria japonica to Pseudoalteromonas elyakovii comb. nov. and the extended description of the species. Int J Syst Evol Microbiol 50:265–271

    PubMed  CAS  Google Scholar 

  • Schafer H, Servais P et al (2000) Successional changes in the genetic diversity of a marine bacterial assemblage during confinement. Arch Microbiol 173(2):138–145

    PubMed  CAS  Google Scholar 

  • Shi Y, McCarren J et al (2012) Transcriptional responses of surface water marine microbial assemblages to deep-sea water amendment. Environ Microbiol 14(1):191–206

    PubMed  CAS  Google Scholar 

  • Shieh WY, Jean WD et al (2003) Marinobacter lutaoensis sp. nov., a thermotolerant marine bacterium isolated from a coastal hot spring in Lutao, Taiwan. Can J Microbiol 49(4):244–252

    PubMed  CAS  Google Scholar 

  • Shigemori H, Bae MA et al (1992) Alteramide A, a new tetracyclic alkaloid from a bacterium Alteromonas sp. associated with the marine sponge Halichondria okadai. J Org Chem 57(15):4317–4320

    CAS  Google Scholar 

  • Shivaji S, Gupta P et al (2005) Marinobacter maritimus sp. nov., a psychrotolerant strain isolated from sea water off the subantarctic Kerguelen islands. Int J Syst Evol Microbiol 55(4):1453–1456

    PubMed  CAS  Google Scholar 

  • Simidu U, Kita-Tsukamoto K et al (1990) Taxonomy of four marine bacterial strains that produce tetrodotoxin. Int J Syst Bacteriol 40(4):331–336

    PubMed  CAS  Google Scholar 

  • Smedile F, Messina E et al (2012) Metagenomic analysis of hadopelagic microbial assemblages thriving at the deepest part of Mediterranean Sea, Matapan-Vavilov Deep. Environ Microbiol 3(10):1462–2920

    Google Scholar 

  • Stamatakis A (2006) RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22(21):2688–2690

    PubMed  CAS  Google Scholar 

  • Sutherland IW (2001) Biofilm exopolysaccharides: a strong and sticky framework. Microbiology 147(1):3–9

    PubMed  CAS  Google Scholar 

  • Suzuki T, Nakamura T et al (2012) Isolation of two novel marine ethylene-assimilating bacteria, Haliea Species ETY-M and ETY-NAG, containing particulate methane monooxygenase-like genes. Microbes Environ 27(1):54–60

    PubMed  PubMed Central  Google Scholar 

  • Tada Y, Taniguchi A et al (2011) Differing growth responses of major phylogenetic groups of marine bacteria to natural phytoplankton blooms in the western North Pacific Ocean. Appl Environ Microbiol 77(12):4055–4065

    PubMed  CAS  PubMed Central  Google Scholar 

  • Talmont F, Vincent P et al (1991) Structural investigation of an acidic exopolysaccharide from a deep-sea hydrothermal vent marine bacteria. Food Hydrocolloid 5:171–172

    CAS  Google Scholar 

  • Tanaka N, Romanenko LA et al (2010) Aestuariibacter litoralis sp. nov., isolated from a sandy sediment of the Sea of Japan. Int J Syst Evol Microbiol 60(2):317–320

    PubMed  CAS  Google Scholar 

  • Tarhriz V, Nematzadeh G et al. (2011) Alishewanella tabrizica sp. nov., isolated from Qurugöl Lake in mountainous region of Azarbayjan. Int J Syst Evol Microbiol 62(8):1986–1991

    Google Scholar 

  • Urios L, Agogué H et al (2008a) Melitea salexigens gen. nov., sp. nov., a gammaproteobacterium from the Mediterranean Sea. Int J Syst Evol Microbiol 58(11):2479–2483

    PubMed  CAS  Google Scholar 

  • Urios L, Intertaglia L et al (2008b) Haliea salexigens gen. nov., sp. nov., a member of the Gammaproteobacteria from the Mediterranean Sea. Int J Syst Evol Microbiol 58(5):1233–1237

    PubMed  CAS  Google Scholar 

  • Urios L, Intertaglia L et al (2009) Haliea rubra sp. nov., a member of the Gammaproteobacteria from the Mediterranean Sea. Int J Syst Evol Microbiol 59(5):1188–1192

    PubMed  CAS  Google Scholar 

  • Van Landschoot A, De Ley J (1983) Intra- and intergeneric similarities of the rRNA cistrons of Alteromonas, Marinomonas (gen. nov.) and some other gram-negative bacteria. J Gen Microbiol 129(10):3057–3074

    Google Scholar 

  • Van Spreekens KJA (1974) The suitability of modification of Long and Hammer’s medium for the enumeration of more fastidious bacteria from fresh fishery products. Arch Lebensmittelhyg 25:213–219

    Google Scholar 

  • Van Trappen S, Tan TL et al (2004a) Alteromonas stellipolaris sp. nov., a novel, budding, prosthecate bacterium from Antarctic seas, and emended description of the genus Alteromonas. Int J Syst Evol Microbiol 54(4):1157–1163

    PubMed  Google Scholar 

  • Van Trappen S, Tan TL et al (2004b) Glaciecola polaris sp. nov., a novel budding and prosthecate bacterium from the Arctic Ocean, and emended description of the genus Glaciecola. Int J Syst Evol Microbiol 54(5):1765–1771

    PubMed  Google Scholar 

  • Vandamme EJ, De Baets S et al (2002) Biopolymers. Polysaccharides I. Polysaccharides from prokaryotes. W. Wiley-VCH, Weinheim, Germany

    Google Scholar 

  • Vandecandelaere I, Nercessian O et al (2008) Alteromonas genovensis sp. nov., isolated from a marine electroactive biofilm and emended description of Alteromonas macleodii Baumann et al. 1972 (Approved Lists 1980). Int J Syst Evol Microbiol 58(11):2589–2596

    PubMed  CAS  Google Scholar 

  • Varbanets LD, Avdeeva LV et al (2011) The Black Sea bacteria – producers of hydrolytic enzymes. Mikrobiol Z 73(5):9–15

    PubMed  CAS  Google Scholar 

  • Vargas WA, Weyman PD et al (2011) [NiFe] Hydrogenase from Alteromonas macleodii with unusual stability in the presence of oxygen and high temperature. Appl Environ Microbiol 77(6):1990–1998

    PubMed  PubMed Central  Google Scholar 

  • Vijayaraghavan R, Rajendran S (2012) Identification of a novel agarolytic γ-Proteobacterium Microbulbifer maritimus and characterization of its agarase. J Basic Microbiol 52(6):705–712

    Google Scholar 

  • Vogel BF, Venkateswaran K et al (2000) Polyphasic taxonomic approach in the description of Alishewanella fetalis gen. nov., sp. nov., isolated from a human foetus. Int J Syst Evol Microbiol 50(3):1133–1142

    PubMed  Google Scholar 

  • Wakabayashi M, Sakatoku A et al (2012) Isolation and characterization of Microbulbifer species 6532A degrading seaweed thalli to single cell detritus particles. Biodegradation 1:93–105

    Google Scholar 

  • Wang J, Mou H et al (2006) Characterization of a novel β-agarase from marine Alteromonas sp. SY37–12 and its degrading products. Appl Microbiol Biotechnol 71(6):833–839

    PubMed  CAS  Google Scholar 

  • Wang CS, Wang Y et al (2009a) Microbulbifer donghaiensis sp. nov., isolated from marine sediment of the East China Sea. Int J Syst Evol Microbiol 59(3):545–549

    PubMed  CAS  Google Scholar 

  • Wang CY, Ng CC et al (2009b) Marinobacter szutsaonensis sp. nov., isolated from a solar saltern. Int J Syst Evol Microbiol 59(10):2605–2609

    PubMed  CAS  Google Scholar 

  • Wang Y, Wang H et al (2010) Aestuariibacter aggregatus sp. nov., a moderately halophilic bacterium isolated from seawater of the Yellow Sea. FEMS Microbiol Lett 309(1):48–54

    PubMed  CAS  Google Scholar 

  • Wang H, Li H et al (2012) Genome sequence of deep-sea manganese-oxidizing bacterium marinobacter manganoxydans MnI7-9. J Bacteriol 194(4):899–900

    PubMed  CAS  PubMed Central  Google Scholar 

  • Weiner RM, Taylor LE II et al (2008) Complete genome sequence of the complex carbohydrate-degrading marine bacterium, Saccharophagus degradans strain 2-40 T. PLoS Genet 4(5):e1000087

    PubMed  PubMed Central  Google Scholar 

  • Weyman PD, Vargas WA et al (2011) Heterologous expression of Alteromonas macleodii and Thiocapsa roseopersicina [NiFe] hydrogenases in Escherichia coli. Microbiology 157(5):1363–1374

    PubMed  CAS  Google Scholar 

  • Wong TY, Preston LA et al (2000) ALGINATE LYASE: review of major sources and enzyme characteristics, structure-function analysis, biological roles, and applications. Annu Rev Microbiol 54(1):289–340

    PubMed  CAS  Google Scholar 

  • Xu XW, Wu YH et al (2008) Marinobacter pelagius sp. nov., a moderately halophilic bacterium. Int J Syst Evol Microbiol 58(3):637–640

    PubMed  CAS  Google Scholar 

  • Yarza P, Ludwing W et al (2010) Update of the all-species living tree project based on 16S and 23S rRNA sequence analyses. Syst Appl Microbiol 33(6):291–299

    PubMed  CAS  Google Scholar 

  • Yi H, Bae KS et al (2004) Aestuariibacter salexigens gen. nov., sp. nov. and Aestuariibacter halophilus sp. nov., isolated from tidal flat sediment, and emended description of Alteromonas macleodii. Int J Syst Evol Microbiol 54(2):571–576

    PubMed  CAS  Google Scholar 

  • Yong JJ, Park SJ et al (2007) Glaciecola agarilytica sp. nov., an agar-digesting marine bacterium from the East Sea, Korea. Int J Syst Evol Microbiol 57(5):951–953

    PubMed  CAS  Google Scholar 

  • Yoon JH, Kim H et al (2003a) Transfer of Pseudomonas elongata Humm 1946 to the genus Microbulbifer as Microbulbifer elongatus comb. nov. Int J Syst Evol Microbiol 53(5):1357–1361

    PubMed  CAS  Google Scholar 

  • Yoon JH, Kim IG et al (2003b) Alteromonas marina sp. nov., isolated from sea water of the East Sea in Korea. Int J Syst Evol Microbiol 53(5):1625–1630

    PubMed  CAS  Google Scholar 

  • Yoon JH, Kim IG et al (2003c) Microbulbifer salipaludis sp. nov., a moderate halophile isolated from a Korean salt marsh. Int J Syst Evol Microbiol 53(1):53–57

    PubMed  CAS  Google Scholar 

  • Yoon JH, Shin DY et al (2003d) Marinobacter litoralis sp. nov., a moderately halophilic bacterium isolated from sea water from the East Sea in Korea. Int J Syst Evol Microbiol 53(2):563–568

    PubMed  CAS  Google Scholar 

  • Yoon JH, Kim IG et al (2004a) Microbulbifer maritimus sp. nov., isolated from an intertidal sediment from the Yellow Sea, Korea. Int J Syst Evol Microbiol 54(4):1111–1116

    PubMed  CAS  Google Scholar 

  • Yoon JH, Yeo SH et al (2004b) Marinobacter flavimaris sp. nov. and Marinobacter daepoensis sp. nov., slightly halophilic organisms isolated from sea water of the Yellow Sea in Korea. Int J Syst Evol Microbiol 54(5):1799–1803

    PubMed  CAS  Google Scholar 

  • Yoon JH, Yeo SH et al (2004c) Alteromonas litorea sp. nov., a slightly halophilic bacterium isolated from an intertidal sediment of the Yellow Sea in Korea. Int J Syst Evol Microbiol 54(4):1197–1201

    PubMed  CAS  Google Scholar 

  • Yoon JH, Jung SY et al (2007a) Microbulbifer celer sp. nov., isolated from a marine solar saltern of the Yellow Sea in Korea. Int J Syst Evol Microbiol 57(10):2365–2369

    PubMed  CAS  Google Scholar 

  • Yoon J-H, Lee M-H et al (2007b) Marinobacter salicampi sp. nov., isolated from a marine solar saltern in Korea. Int J Syst Evol Microbiol 57(9):2102–2105

    PubMed  CAS  Google Scholar 

  • Yoon JH, Kang SJ et al (2012) Salinimonas lutimaris sp. nov., a polysaccharide-degrading bacterium isolated from a tidal flat. Antonie Van Leeuwenhoek 101(4):803–810

    PubMed  CAS  Google Scholar 

  • Young KS, Bhattacharjee SS et al (1978) Enzymatic cleavage of the α-linkages in agarose, to yield agaro-oligosaccharides. Carbohydr Res 66(1):207–212

    CAS  Google Scholar 

  • Yuan L, Ren L et al (2011) A complete genome assembly of Glaciecola mesophila sp. nov. sequenced by using BIGIS-4 sequencer system. Sci China Life Sci 54(9):835–840

    PubMed  CAS  Google Scholar 

  • Zemb O, West N et al (2010) Effect of a transient perturbation on marine bacterial communities with contrasting history. J Appl Microbiol 109(3):751–762

    PubMed  CAS  Google Scholar 

  • Zhang DC, Yu Y et al (2006) Glaciecola psychrophila sp. nov., a novel psychrophilic bacterium isolated from the Arctic. Int J Syst Evol Microbiol 56(12):2867–2869

    PubMed  CAS  Google Scholar 

  • Zhang DC, Li HR et al (2008) Marinobacter psychrophilus sp. nov., a psychrophilic bacterium isolated from the Arctic. Int J Syst Evol Microbiol 58(6):1463–1466

    PubMed  CAS  Google Scholar 

  • Zhang YJ, Zhang XY et al (2011) Glaciecola arctica sp. nov., isolated from Arctic marine sediment. Int J Syst Evol Microbiol 61(10):2338–2341

    PubMed  CAS  Google Scholar 

  • Zhao K, Guo LZ et al (2012) Extracellular production of novel halotolerant, thermostable, and alkali-stable carboxymethyl cellulase by marine bacterium; Marinimicrobium sp. LS-A18. Appl Biochem Biotechnol 168(3):550–567

    Google Scholar 

  • Zheng L, Han X et al (2005) Marine bacteria associated with marine macroorganisms: the potential antimicrobial resources. Ann Microbiol 55(2):119–124

    CAS  Google Scholar 

  • Zhuang DC, Chen YG et al (2009) Marinobacter zhanjiangensis sp. nov., a marine bacterium isolated from sea water of a tidal flat of the South China Sea. Antonie Van Leeuwenhoek 96(3):295–301

    PubMed  Google Scholar 

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López-Pérez, M., Rodriguez-Valera, F. (2014). The Family Alteromonadaceae . In: Rosenberg, E., DeLong, E.F., Lory, S., Stackebrandt, E., Thompson, F. (eds) The Prokaryotes. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-38922-1_233

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