Abstract
The only hitherto known species of the monotypic genus Tromeropsis, the rarely reported T. microtheca, is redescribed from recent collections on mostly little decayed, grayed, xeric, sun-exposed wood of decorticated trunks and branches of different gymnosperms, exceptionally angiosperms, from different humid regions of central Europe and a dry area in Macaronesia. Two further, very similar species are here newly described from decayed xeric wood of different angiosperm trees and shrubs from dry to arid regions of North America, Australia, and Macaronesia. Characteristics of the genus are: black sessile apothecia, dark olivaceous exudate, fissitunicate multi-spored asci, minute, cylindrical to ellipsoid, hyaline ascospores, a yeast-like asexual morph, and, in some species, a synanamorph with allantoid conidia formed on integrated conidiogenous cells reminiscent of the genus Lecythophora but with holoblastic conidiogenesis. A lectotype is designated for the type species of the likewise sexually typified, monotypic, illegitimate genus Microspora, M. dura, which was re-examined from the original material and found to be a later synonym of T. microtheca. Nuclear rDNA data were obtained from two collections of T. microtheca and four collections of the two new species. DNA sequences of T. microtheca match those from asexual morph isolates or environmental samples in public databases. Different misapplied names attributed to sequences from asexual morph isolates gained from coniferous wood from northern Europe, North America, and eastern Asia were re-identified as T. microtheca. A very close relationship between Tromeropsis and the type species of the asexually typified genus Symbiotaphrina, S. buchneri, was observed. Independent molecular phylogenetic analyses of three rDNA regions (partial SSU, ITS, partial LSU) each place Tromeropsis and the type species of Symbiotaphrina in a single supported clade without showing clear limits between the two genera. Based on multigene analysis, Symbiotaphrina was recently placed together with the small order Xylonales in the new class Xylonomycetes. We here validate the order Symbiotaphrinales previously published as nom. nud. and describe the family Symbiotaphrinaceae. Since the name Symbiotaphrina was validated one year before Tromeropsis was published, and is more widely used, it is adopted here and T. microtheca combined into Symbiotaphrina. rDNA data further suggest that two members of the asexually typified genus Hyphozyma, H. lignicola and H. sanguinea, belong to Symbiotaphrina, whereas the type species of Hyphozyma, H. variabilis, clusters in the Thelebolales (Leotiomycetes), where it is a later synonym of Cleistothelebolus nipigonensis, the type species of Cleistothelebolus. The new combinations S. lignicola and S. sanguinea are proposed, to which the newly described species S. desertorum and S. larreae are added. Based on their close relationship and a similar yeast-like asexual morph in pure culture, we hypothesize that the life cycles of all these wood-inhabiting taxa include a symbiotic phase in the gut of arthropods and, conversely, we suppose that the life cycles of S. buchneri and S. kochii include unknown sexual morphs growing on plant substrate.
Similar content being viewed by others
Notes
yeast-like symbionts
References
Baral HO, Marson G (2012) Deltopyxis triangulispora gen. et sp. nov., a polysporous Tromeropsis-like discomycete of unclear relationship. Andrias 19:175–183
Baral HO, Weber E, Gams W, Hagedorn G, Liu B, Liu XZ, Marson G, Marvanová L, Stadler M, Weiß M (2017) Generic names in the Orbiliaceae (Orbiliomycetes) and recommendations on which names should be protected or suppressed. Mycol Progress. https://doi.org/10.1007/s11557-017-1300-6
Berbee ML (2001) The phylogeny of plant and animal pathogens in the Ascomycota. Physiol Mol Plant Path 59:165–187
Bhattacharya D, Reeb V, Simon DM, Lutzoni F (2005) Phylogenetic analyses suggest reverse splicing spread of group I introns in fungal ribosomal DNA. BMC Evol Biol 5:68
Boehm EWA, Mugambi GK, Miller AN, Huhndorf SM, Marincowitz S, Spatafora JW, Schoch CL (2009) A molecular phylogenetic reappraisal of the Hysteriaceae, Mytilinidiaceae and Gloniaceae (Pleosporomycetidae, Dothideomycetes) with keys to world species. Stud Mycol 64:49–83
Boudier É (1907) Histoire et classification des discomycètes d’Europe. Librairie des Sciences Naturelles, Paris
Buchner P (1928) Holznahrung und Symbiose. Julius Springer, Berlin
Buchner P (1960) Tiere als Mikrobenzüchter. Julius Springer, Berlin, Heidelberg
Buchner P (1965) Endosymbiosis of animals with plant microorganisms. Interscience Publishers, New York
Cheng CH, Xu LT, Xu DD, Lou QZ, Lu M, Sun JH (2016) Does cryptic microbiota mitigate pine resistance to an invasive beetle–fungus complex? Implications for invasion potential. Sci Rep 6:33110. https://doi.org/10.1038/srep33110
Collado J, Rubio V, Galán R, Platas G, Arenal F, González V, Sánchez-Ballesteros J, Villarreal M, Baral HO, Peláez F (2002) Molecular phylogeny of ascomycetes from the Helotiales. In: 7th International Mycological Congress (IMC 7) book of abstracts, Oslo, Norway, August 2002, vol 196
Crous PW, Summerell BA, Shivas RG, Burgess TI, Decock CA, Dreyer LL, Granke LL, Guest DI, Hardy GEStJ, Hausbeck MK, Hüberli D, Jung T, Koukol O, Lennox CL, Liew ECY, Lombard L, McTaggart AR, Pryke JS, Roets F, Saude C, Shuttleworth LA, Stukely MJC, Vánky K, Webster BJ, Windstam ST, Groenewald JZ (2012) Fungal Planet description sheets: 107–127. Persoonia 28:138–182
de Hoog GS, Smith MT (1981) Hyphozyma, a new genus of yeast-like hyphomycetes. Antonie Van Leeuwenhoek 47:339–352
de Hoog GS, Smith MT (1986) Key to the species of Hyphozyma (yeast-like hyphomycetes) and description of H. roseonigra sp. nov. Antonie Van Leeuwenhoek 52:39–44
de Hoog GS, Göttlich E, Platas G, Genilloud O, Leotta G, van Brummelen J (2005) Evolution, taxonomy and ecology of the genus Thelebolus in Antarctica. Stud Mycol 51:33–76
Döring H, Triebel D (1998) Phylogenetic relationships of Bulgaria inferred by 18S rDNA sequence analysis. Cryptog Bryol Lichénol 19:123–136
Doveri F, Sarrocco S, Vannacci G (2013) Studies on three rare coprophilous plectomycetes from Italy. Mycotaxon 124:279–300
Ellis MB, Ellis JP (1985) Microfungi on land plants. An identification handbook. Croom Helm, London & Sydney
Eriksson OE, Baral HO, Currah RS, Hansen K, Kurtzman CP, Læssøe T, Rambold G (2003) Notes on ascomycete systematics. Nos 3580–3623. Myconet 9:91–103
Gams W, von Arx JA (1980) Validation of Symbiotaphrina (imperfect yeasts). Persoonia 10:542–543
Gargas A, DePriest PT, Taylor JW (1995) Positions of multiple insertions in SSU rDNA of lichen-forming fungi. Mol Biol Evol 12:208–218
Gazis R, Miadlikowska J, Lutzoni F, Arnold AE, Chaverri P (2012) Culture-based study of endophytes associated with rubber trees in Peru reveals a new class of Pezizomycotina: Xylonomycetes. Mol Phylogenet Evol 65:294–304
Gazis R, Kuo A, Riley R, Labutti K, Lipzen A, Lin J, Amirebrahimi M, Hesse CN, Spatafora JW, Henrissat B, Hainaut M (2016) The genome of Xylona heveae provides a window into fungal endophytism. Fungal Biol 120:26–42
Gräbner KE (1954) Vergleichend morphologische und physiologische Studien an Anobiiden- und Cerambyciden-Symbionten. Z Morph Ökol Tiere 42:471–528
Groves JW (1952) The genus Tympanis. Can J Bot 30:571–651
Hawksworth DL, Sherwood MA (1981) A reassessment of three widespread resinicolous discomycetes. Can J Bot 59:357–372
Hutchison LJ, Sigler L, Hiratsuka Y (1993) Hyphozyma lignicola sp. nov., a yeast-like hyphomycete from black galls and cankers of trembling aspen (Populus tremuloides). Mycol Res 97:1409–1415
Johansen S, Haugen P (2001) A new nomenclature of group I introns in ribosomal DNA. RNA 7:935–936
Jones KG, Blackwell M (1996) Ribosomal DNA sequence analysis places the yeast-like genus Symbiotaphrina within filamentous ascomycetes. Mycologia 88:212–218
Jurzitza G (1964) Studien an der Symbiose der Anobiiden. II. Physiologische Studien am Symbionten von Lasioderma serricorne F. Arch Mikrobiol 49:331–340
Karsten PA (1888) Symbolae ad Mycologiam fennicam XXV. Medd Soc Fauna Flora Fenn 16:20–26
Kearse M, Moir R, Wilson A, Stones-Havas S, Cheung M, Sturrock S, Buxton S, Cooper A, Markowitz S, Duran C, Thierer T, Ashton B, Mentjies P, Drummond A (2012) Geneious Basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data. Bioinformatics 28:1647–1649
Ki JS, Han MS (2007) Complete sequence and secondary structure of the large subunit ribosomal RNA from the harmful unarmored dinoflagellate Akashiwo sanguinea. DNA Seq 18:19–25. https://doi.org/10.1080/10425170600909326
Kubart A, Vasaitis R, Stenlid J, Dahlberg A (2016) Fungal communities in Norway spruce stumps along a latitudinal gradient in Sweden. Forest Ecol Manag 371:50–58. https://doi.org/10.1016/j.foreco.2015.12.017
Kühlwein H, Jurzitza G (1961) Studien an der Symbiose der Anobiiden. 1. Mitteilung: Die Kultur des Symbionten von Sitodrepa panicea L. Arch Mikrobiol 40:247–260
Landvik S, Kristiansen R, Schumacher T (1998) Phylogenetic and structural studies in the Thelebolaceae (Ascomycota). Mycoscience 39:49–56
Lygis V, Vasiliauskaite I, Matelis A, Pliūra A, Vasaitis R (2014) Fungi in living and dead stems and stumps of Pinus mugo on coastal dunes of the Baltic Sea. Plant Protect Sci 50:221–226
Maekawa N, Tsuneda A (2001) Eleutheromyces longispora sp. nov., with a Hyphozyma synanamorph isolated from decaying basidioma of Trametes versicolor. Mycotaxon 78:167–174
Maifeld D (1998) Endophytische Pilze der Fichte (Picea abies L. Karst.). Neue Aspekte zur biologischen Kontrolle von Heterobasidion annosum (Fr.) Bref. Dissertation, Universität Tübingen, 301 pp
Malloch D, Cain RF (1971) Four new genera of cleistothecial ascomycetes with hyaline ascospores. Can J Bot 49:847–854
May T (2015) Advice to mycologists concerning article 57.2. IMA Fungus 6:43–44
Noda H, Kodama K (1996) Phylogenetic position of yeastlike endosymbionts of anobiid beetles. Appl Environ Microbiol 62:162–167
Oh SK, Kamdem DP, Keathley DE, Han KH (2003) Detection and species identification of wood-decaying fungi by hybridization of immobilized sequence-specific oligonucleotide probes with PCR-amplified fungal ribosomal DNA internal transcribed spacers. Holzforschung 57:346–352
Rehm, H. (1889) [1887–1896] Ascomyceten: Hysteriaceen und Discomyceten. Rabenhorst’s Kryptogamen-Flora von Deutschland, Österreich und der Schweiz, vol. 1, 3. E. Kummer, Leipzig
Saccardo PA (1889) Sylloge fungorum omnium hucusque cognitorum 8. Padua
Schoch CL, Sung GH, López-Giráldez F, Townsend JP, Miadlikowska J, Hofstetter V, Robbertse B, Matheny PB, Kauff F, Wang Z, Gueidan C et al (2009) The Ascomycota tree of life: a phylum-wide phylogeny clarifies the origin and evolution of fundamental reproductive and ecological traits. Syst Biol 58:224–239
Schoch CL, Seifert KA, Huhndorf S, Robert V, Spouge JL, Levesque CA, Chen W (2012) Nuclear ribosomal internal transcribed spacer (ITS) region as a universal DNA barcode marker for fungi. Proc Natl Acad Sci U S A 109:6241–6246
Seifert K, Morgan-Jones G, Gams W, Kendrick B (2011) The genera of hyphomycetes. CBS Biodivers Ser 9:1–997
Sláviková E, Grabiňska-Loniewska A (1992) Sporobolomyces lactosus, a new species of ballistosporous yeast equipped with ubiquinone-10. Antonie Van Leeuwenhoek 61:245–248
Suh SO, Marshall CJ, McHugh JV, Blackwell M (2003) Wood ingestion by passalid beetles in the presence of xylose-fermenting gut yeasts. Mol Ecol 12:3137–3145
Tamura K, Stecher G, Peterson D, Filipski A, Kumar S (2013) MEGA6: molecular evolutionary genetics analysis version 6.0. Mol Biol Evol 30:2725–2729
Taylor JJ (1977) Sporothrix sanguinea, sp. nov. Mycologia 69:651–653
Terhonen E, Sun H, Buée M, Kasanen R, Paulin L, Asiegbu FO (2013) Effects of the use of biocontrol agent (Phlebiopsis gigantea) on fungal communities on the surface of Picea abies stumps. Forest Ecol Manag 310:428–433
Vasaitis R, Burnevica N, Uotila A, Dahlberg A, Kasanen R (2016) Cut Picea abies stumps constitute low quality substrate for sustaining biodiversity in fungal communities. Balt For 22:239–245
Vega FE, Dowd PF (2005) The role of yeasts as insect endosymbionts. In: Vega FE, Blackwell M (eds) Insect–fungal associations: ecology and evolution. Oxford University Press, Oxford, pp 211–243
Velenovský J (1934) Monographia Discomycetum Bohemiae. Vol. 1, 2. Prague
Vu D, Groenewald M, Szöke S, Cardinali G, Eberhardt U, Stielow B, de Vries M, Verkleij GJM, Crous PW, Boekhout T, Robert V (2016) DNA barcoding analysis of more than 9 000 yeast isolates contributes to quantitative thresholds for yeast species and genera delimitation. Stud Mycol 85:91–105
Weber E (1992) Untersuchungen zu Fortpflanzung und Ploidie verschiedener Ascomyceten. Bibl Mycol 140:1–186
Weber E (2002) The Lecythophora–Coniochaeta complex: I. Morphological studies on Lecythophora species isolated from Picea abies. Nova Hedwigia 74:159–185
Weber E, Görke C, Begerow D (2002) The Lecythophora–Coniochaeta complex: II. Molecular studies based on sequences of the large subunit of ribosomal DNA. Nova Hedwigia 74:187–200
Wei W, McCusker JH, Hyman RW, Jones T, Ning Y, Cao Z, Gu Z, Bruno D, Miranda M, Nguyen M, Wilhelmy J, Komp C, Tamse R, Wang X, Jia P, Luedi P, Oefner PJ, David L, Dietrich FS, Li Y, Davis RW, Steinmetz LM (2007) Genome sequencing and comparative analysis of Saccharomyces cerevisiae strain YJM789. Proc Natl Acad Sci U S A 104:12825–12830
Yarza P, Yilmaz P, Pruesse E, Glöckner FO, Ludwig W, Schleifer KH, Whitman WB, Euzéby J, Amann R, Rosselló-Móra R (2014) Uniting the classification of cultured and uncultured bacteria and archaea using 16S rRNA gene sequences. Nat Rev Microbiol 12:635–645
Zhuang WY, Yu ZH, Wu WP, Langue C, Fouret N (2000) Preliminary notes on phylogenetic relationships in the Encoelioideae inferred from 18S rDNA sequences. Mycosystema 19:478–484
Acknowledgements
We are very thankful to Martin Bemmann for providing relevant literature and Regina Siemianowski and Lothar Krieglsteiner for sending their data of Bavarian collections of S. microtheca and two specimens for study. Keith A. Seifert is gratefully thanked for giving us detailed location data about his Canadian isolate, Eeva Terhonen and Anders Dahlberg for data of their isolates from Finland, Eeva also for supplying the whole set of sequences referrable to S. microtheca, and Natalija Burnevica & Rimvys Vasaitis and Vaidotas Lygis for chromatograms of their Finnish and Lithuanian strains, respectively. Sylvie Hermant from the National Natural History Museum in Luxembourg is greatly thanked for gaining sequences of Symbiotaphrina (Tromeropsis) spp. G.J.M. Verkleij (Westerdijk Fungal Biodiversity Institute) is acknowledged for providing LSU sequences of our S. microtheca cultures deposited in CBS, and Peik Haugen for help in the identification of intron positions. Roland Kirschner is thanked for critical comments and valuable contributions.
Author information
Authors and Affiliations
Corresponding authors
Ethics declarations
*, Living state; †, Dead state; IKI, Lugol’s solution (highly concentrated): ~ 1% I2, 2% KI, in H2O; KOH, Potassium hydroxide, 5–10%; CRSDS, Congo Red with sodium dodecyl sulfate; CRB, Brilliant Cresyl Blue, ~ 1% in H2O; LBs, Lipid bodies (oil drops); ø, Unpreserved; a.i., Asexual morph obtained from ascospore isolate; a.o., Asexual morph only; d.v., Documentation seen; n.v., No material or documentation seen. Values in { } indicate the number of collections that were examined. Private herbaria: H.B., H.O. Baral; G.M., G. Marson; R.S., Regina Siemianowski (in Herbarium Nationalpark Bayerischer Wald); official herbaria listed in the Index Herbariorum: H (Helsinki), M (Munich), PRM (Prague), TFC Mic. (Herbarium of the University of La Laguna, section mycology)
Addendum
A sequence of S. microtheca from one of the collections on Fagus (H.B. 10124) was obtained too late to be included in the manuscript. In the ITS region, it fully agrees with the collection on Abies (H.B. 10054, KY657581) and thus confirms our previous finding, based on a sequence of the collection on Adenocarpus (TFC Mic. 24159, MF594685), that S. microtheca can also occur on angiosperm hosts.
Additional information
Section Editors: Teresa Iturriaga and Marc Stadler
This article is part of the “Special Issue on ascomycete systematics in honour of Richard P. Korf who died in August 2016”.
Electronic supplementary material
Below are the links to the electronic supplementary material.
Online Resource 1
Alignment of partial SSU corresponding to ML phylogeny of Fig. 1. (FAS 10 kb)
Online Resource 2
Alignment of partial LSU corresponding to ML phylogeny of Fig. 2 (FAS 10 kb)
Online Resource 3
Alignment of ITS1-5.8S-ITS2 corresponding to ML phylogeny of Fig. 3. (FAS 16 kb)
Online Resource 4
Alignment of S1506 intron corresponding to ML phylogeny of Fig. 4. (FAS 6 kb)
Online Resource 5
Alignment of partial SSU + ITS1-5.8S-ITS2 + partial LSU corresponding to ML phylogeny of Fig. 5. (FAS 32 kb)
Rights and permissions
About this article
Cite this article
Baral, H.O., Weber, E., Marson, G. et al. A new connection between wood saprobism and beetle endosymbiosis: the rarely reported saprobic discomycete Tromeropsis is congeneric with the symbiotic yeast Symbiotaphrina (Symbiotaphrinales, Xylonomycetes) and two asexual morphs misplaced in Hyphozyma . Mycol Progress 17, 215–254 (2018). https://doi.org/10.1007/s11557-017-1340-y
Received:
Revised:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s11557-017-1340-y