Abstract
Genetic engineering using clustered regularly interspaced short palindromic repeats (CRISPR) and CRISPR-associated protein (Cas9) has revolutionized biomedical science, uncovering the function of genes involved in health and disease. C. elegans is a powerful genetic model that allows us to understand the impact of altered genes from the molecular level to behavior.
Here, I describe a protocol to knock out genes in C. elegans by employing multiple sgRNAs combined with the homologous recombination-mediated repair.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
References
Ahringer J (2006) Reverse genetics. WormBook:1–43
Frøkjær-Jensen C (2013) Exciting prospects for precise engineering of Caenorhabditis elegans genomes with CRISPR/Cas9. Genetics 195(3):635–642
Schwartz ML, Jorgensen EM (2016) SapTrap, a toolkit for high-throughput CRISPR/Cas9 gene modification in Caenorhabditis elegans. Genetics 202(4):1277–1288
Dickinson DJ, Goldstein B (2016) CRISPR-based methods for caenorhabditis elegans genome engineering. Genetics 202(3):885–901
Dickinson DJ, Ward JD, Reiner DJ, Goldstein B (2013) Engineering the Caenorhabditis elegans genome using Cas9-triggered homologous recombination. Nat Methods 10(10):1028–1034
Waaijers S, Boxem M (2014) Engineering the Caenorhabditis elegans genome with CRISPR/Cas9. Methods 68(3):381–388
Barrangou R, Dudley EG (2016) CRISPR-based typing and next-generation tracking technologies. Annu Rev Food Sci Technol 7(1):annurev-food-022814-015729
Molla KA et al (2020) Wide horizons of CRISPR-Cas-derived technologies for basic biology, agriculture, and medicine. In: Islam MT, Bhowmik PK, Molla KA (eds) CRISPR-Cas methods, Springer protocols handbooks. Humana, New York, NY
Stiernagle T (2006) Maintenance of C. elegans. WormBook (1999):1–11
Xenbase N et al (2018) Eukaryotic genomic databases, vol 1757. Springer New York, New York, NY
Schwartz M, Jorgensen EM (2018) SapTrap Builder: a desktop utility for CRISPR edit design. microPublication Biol 2018:1–2
Téllez-Arreola JL, Silva M, Martínez-Torres A (2020) MCTP-1 modulates neurotransmitter release in C. elegans. Mol Cell Neurosci 107:103528
Evans T (2006) Transformation and microinjection. WormBook:1–15
Frøkjær-Jensen C et al (2008) Single-copy insertion of transgenes in Caenorhabditis elegans. Nat Genet 40(11):1375–1383
Frøkjær-Jensen C et al (2016) An abundant class of non-coding DNA can prevent stochastic gene silencing in the C. elegans germline. Cell 166(2):343–357
Acknowledgments
Thank you to Dr. Erik Jorgensen (UU, HHMI) for hosting J.L.T.A. during the Fulbright program 2018–2019. This research was funded by an NIGMS grant to EMJ R01 GM095817. José Luis Téllez-Arreola is a grantee of Fulbright-Garcia Robles para investigadores de COMEXUS.
Author information
Authors and Affiliations
Corresponding author
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2021 The Author(s), under exclusive license to Springer Science+Business Media, LLC, part of Springer Nature
About this protocol
Cite this protocol
Téllez-Arreola, J.L. (2021). Gene Targeting in Caenorhabditis elegans Using a Combination of Multiple sgRNAs and a Homologous Recombination-Mediated Repair. In: Islam, M.T., Molla, K.A. (eds) CRISPR-Cas Methods. Springer Protocols Handbooks. Humana, New York, NY. https://doi.org/10.1007/978-1-0716-1657-4_23
Download citation
DOI: https://doi.org/10.1007/978-1-0716-1657-4_23
Published:
Publisher Name: Humana, New York, NY
Print ISBN: 978-1-0716-1656-7
Online ISBN: 978-1-0716-1657-4
eBook Packages: Springer Protocols