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Genomics in Management and Genetic Enhancement of Potato Germplasm

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The Potato Genome

Part of the book series: Compendium of Plant Genomes ((CPG))

Abstract

The systematic characterization and utilization of naturally occurring genetic variation in the plant genetic resources have become an important approach in plant genome research and breeding. The development of molecular techniques now allows a more accurate analysis of a large collections of potato germplasm. The rapid progress in high-throughput technology such as next-generation sequencing (NGS) offers an exciting tool for novel gene discovery involved in phenotypic traits expression. In the years to come, genomics, transcriptomics and other ‘omics’ technologies will play a key role in potato improvement. The discovery and high-throughput screening of single nucleotide polymorphism (SNP), the presence/absence of allelic variations in diverse germplasm collections will give a detailed insight into the origin, domestication and available trait-relevant variations in the polyploid crops such as potato. In the process, novel approaches and possibilities for marker/genomics-assisted potato breeding are facilitated. This chapter highlights the use of potato genome sequence in management and the genetic enhancement of the potato through its characterization and identification of novel gene/QTL/allele followed by their applications in potato improvement with agricultural relevance.

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Acknowledgements

The authors thank CABin, IASRI for financial support to carry out the whole genome sequencing of dihaploid potato clone ‘C-13’.

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Authors and Affiliations

  1. ICAR-Central Potato Research Institute, Shimla, Himachal Pradesh, 171 001, India

    Jagesh Kumar Tiwari, Sapna Devi, Swarup Kumar Chakrabarti, Shashi Rawat & M. Nagesh

  2. ICAR-Central Potato Research Station, Kufri-Shimla, Himachal Pradesh, 171 012, India

    Vinod Kumar

  3. ICAR-Central Potato Research Institute Campus, Modipuram, Meerut, Uttar Pradesh, 250 110, India

    S. K. Luthra

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  1. Jagesh Kumar Tiwari
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  2. Vinod Kumar
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  3. Sapna Devi
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  4. S. K. Luthra
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  5. Swarup Kumar Chakrabarti
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  6. Shashi Rawat
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  7. M. Nagesh
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Corresponding author

Correspondence to Jagesh Kumar Tiwari .

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Editors and Affiliations

  1. ICAR-Central Potato Research Institute, Shimla, Himachal Pradesh, India

    Swarup Kumar Chakrabarti

  2. Key Laboratory of Horticultural Plant Biology, Huazhong Agricultural University, Wuhan, China

    Conghua Xie

  3. ICAR-Central Potato Research Institute, Shimla, Himachal Pradesh, India

    Jagesh Kumar Tiwari

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Tiwari, J.K. et al. (2017). Genomics in Management and Genetic Enhancement of Potato Germplasm. In: Kumar Chakrabarti, S., Xie, C., Kumar Tiwari, J. (eds) The Potato Genome. Compendium of Plant Genomes. Springer, Cham. https://doi.org/10.1007/978-3-319-66135-3_8

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