Science of the Total Environment 541 (2016) 1161–1171
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Science of the Total Environment
journal homepage: www.elsevier.com/locate/scitotenv
Performance evaluation and validation of ecological indices toward
site-specific application for varying benthic conditions in Korean coasts
Jongseong Ryu a, Seongjin Hong b, Won Keun Chang c, Jong Seong Khim b,⁎
a
b
c
Department of Marine Biotechnology, Anyang University, Ganghwa-gun, Incheon, Republic of Korea
School of Earth and Environmental sciences & Research Institute of Oceanography, Seoul National University, Seoul, Republic of Korea
Korea Maritime Institute, Busan, Republic of Korea
H I G H L I G H T S
G R A P H I C A L
A B S T R A C T
• Performance of several univariate
and multivariate benthic indices was
evaluated.
• Macrozoobenthic biodiversity was generally well reflected by land use and
activities.
• EQR was the most appropriate index for
assessing the benthic quality of Korean
coasts.
• Application of multi-indices was useful
for evaluating ecological status vs.
pollution.
a r t i c l e
i n f o
Article history:
Received 13 July 2015
Received in revised form 16 September 2015
Accepted 4 October 2015
Available online xxxx
Editor: D. Barcelo
Keywords:
Benthos
Invertebrates
Macrofauna
Benthic indices
Sediment quality
Heavy metals
a b s t r a c t
Although several ecological indices have been developed worldwide to assess the ecological quality (EcoQ) status
of coastal environments, their applicability remains in question. The present study evaluated the performance of
14 univariate and multivariate indices selected to provide a good description of benthic EcoQ status. We specifically investigated on i) spatial and regional variability, ii) (dis)similarity between ecological indices, and iii) the
association of selected indices against heavy metal pollution. Benthic community data were collected from six
coastal regions of Korea (n = 365) that have varying land-use activity in adjacent inland areas (municipal, industrial, and rural). Abiotic sedimentary parameters were also considered as possible pressures associated with
benthic community responses, including grain size, organic carbon content, and heavy metal pollution. The
macrozoobenthic biodiversity and EcoQ results generally well reflected the geographical settings and the
pollution gradient of heavy metals between regions. Among the six selected indices (H′, AMBI, BPI, BQI, EQR,
and M-AMBI), BPI appeared to be the most tolerant index, with N 90% of locations being classified as “High” to
“Good” while EQR showed the clear classification across the EcoQ status range. Significant disagreement
between BQI vs. AMBI, BPI vs. M-AMBI, and AMBI vs. M-AMBI were found. Overall, single or limited indices
seemed to over- or underestimate the given benthic conditions, warranting the use of site-specific indices at specific areas and/or locations. In conclusion, our study demonstrates the utility of applying different ecological or
⁎ Corresponding author at: School of Earth and Environmental Sciences & Research Institute of Oceanography, Seoul National University, Seoul 08826, Republic of Korea.
E-mail address: jskocean@snu.ac.kr (J.S. Khim).
http://dx.doi.org/10.1016/j.scitotenv.2015.10.016
0048-9697/© 2015 Elsevier B.V. All rights reserved.
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J. Ryu et al. / Science of the Total Environment 541 (2016) 1161–1171
multivariate indices to infer the general ecological status of specific sites to gauge the extent of sedimentary
pollution.
© 2015 Elsevier B.V. All rights reserved.
1. Introduction
The legal regulation of coastal pollution has been increasing to counteract concerns about various anthropogenic stresses and to determine
the ecological integrity of estuaries and coastal waters worldwide (Borja
and Dauer, 2008; Fitch and Crowe, 2010). The first step in coastal
ecosystem assessment is to quantify ecological responses. Thus, the
assessment of ecological quality (EcoQ) status represents a key component of management tools, such as Marine Spatial Planning, aiming for
the protection and sustainable use of marine and coastal waters
(Hennessey and Nichols, 2011). An integral part of assessing ecological
quality status involves various measurements of biological endpoints
and/or environmental parameters.
A range of taxa have been targeted being utilized as indicators of the
ecological status of coastal and marine systems. Such analyses involve
assessing the typical assemblages of macroalgae, phytoplankton, sea
grasses (Ballesteros et al., 2007), fish (Coates et al., 2007), and benthic
macroinvertebrates (Borja et al., 2000; Cusack et al., 2005; Dauvin and
Ruellet, 2007; Labrune et al., 2006; Muxika et al., 2007; Rosenberg
et al., 2004; Simboura and Zenetos, 2002; Weisberg et al., 1997). However, few studies seemed to consider the dynamic interaction between
biotic and abiotic conditions, when addressing the index performances.
Consequently, events, such as episodic pollution, may mask biological
associations with environmental changes when monitoring typical
marine ecosystems (Maurer et al., 1999).
Coastal and marine sediments are considered to act as final sinks for
land-based pollution (Borja et al., 2000), and represent sites where
dynamic biological associations with environmental stresses tend to
be expected. As benthic macrofauna primarily inhabit the top layers of
the sediment, epifaunal community changes in structure might provide
sufficient evidence for certain impacts by pollution. Benthic macroinvertebrates (i.e., clams, crabs, and polychaetes) are also present in the
water column during a certain period of their life-histories (i.e., the
larval stage); thus, benthic community may represent an integrative
index of coastal and marine environmental health (Blanchet et al.,
2008). Benthic organisms have also certain common characteristics,
such as sedentary behavior and relatively long lifetime, which may provide better indication of bioaccumulation and biomagnification (Dauer,
1993; Reiss and Kröncke, 2005).
It is vital to quantify the spatio-temporal assemblages of benthic
macroinvertebrate in given environments representing a key component of ecological impact assessments. Several benthic indices have
been developed and validated as sensitive indicators of environmental
quality in coastal sediments (Diaz et al., 2004; Marques et al., 2009).
However, using benthic indices for sediment assessments across
a range of geographic regions may be problematic, because many benthos are associated with specific habitats and/or limited ecoregions
(Borja and Dauer, 2008). Given the large number of indices, metrics,
and evaluation tools available when using benthic community data,
emphasis should be placed on evaluating the suitability of existing indices, rather developing new ones (Borja and Dauer, 2008; Borja et al.,
2008; Diaz et al., 2004). Several studies have compared the performance
of different benthic indices (Benyi et al., 2009; Blanchet et al., 2008;
Borja et al., 2007, 2008; Fitch and Crowe, 2010; Labrune et al., 2006;
Quintino et al., 2006; Ranasinghe et al., 2002; Teixeira et al., 2012;
Zettler et al., 2007). However, most of these studies only compared a
few indices, with no widely accepted generalizations being suggested.
In the present study, we aimed to test the applicability of a set of univariate and multivariate indices for a better description of ecological
quality status using a large data set (n = 365 sites). Our meta-data
set of six coastal regions in Korea encompassed all of three coastal
seas of the Korean peninsula with varying land-use activities in adjacent
inland areas (three municipal, two industrial, and one rural). The
abiotic sedimentary parameters that were considered as possible pressures associated with biological responses (viz., benthic community
structure) included sediment particle size (Van Hoey et al., 2004),
organic carbon content (Hyland et al., 2005), and heavy metal
concentrations (Dauvin, 2008). Specifically, we examined the spatial
variability of 14 ecological endpoints in six coastal regions, with
respect to i) (dis)similarity between biotic indices, ii) regional
comparability using selected multivariate indices, iii) performance
evaluation of selected indices, and iv) the association of selected
indices with metal pollution, as one example of environmental
changes.
2. Materials and methods
2.1. Study area and site descriptions
A total of 365 locations were investigated in six coastal areas of
Korea from 1995 to 1998. Sampling year, number of locations, target
sedimentary parameters, surrounding activities, and current management regime are shown in Fig. 1. The six study areas were selected to
be representative of west (Gyeonggi Bay and Yeongsan River Estuary),
south (Gwangyang Bay, Masan Bay, and Jinhae Bay), and east (Ulsan
Bay) Korean coastal waters. All semi-closed six areas were characterized
by the dominance of soft bottoms and shallow water depth (ca. 20–
30 m), with decreasing tidal regimes from the west (macro) to south
(meso) and further to east (micro) coasts. Four areas (Gyeonggi Bay,
Gwangyang Bay, Masan Bay, and Ulsan Bay) were expected to be
influenced by land-based pollution because they are surrounded by
highly industrialized cities, and are currently designated as Special Management Areas (SMA). The management plans of these areas were
established in 2001–2008 by the Korean Marine Environment Act.
Among six study areas, Masan Bay and Ulsan Bay are the most polluted
areas by heavy metals and organic pollutants where feasibility studies
are currently performed to establish Total Maximum Daily Loads
(TMDL) for heavy metals. Because of microtidal regime, semi-closed
bay and heavy land-based pollution, the two areas showed a slow rate
of water exchange followed by a trapping effect of pollutants discharged
from surrounding industrial complexes and municipalities (Khim and
Hong, 2014).
Later, the total pollution load management system (TPLMS), which
is similar to TMDL in the USA, was applied to Masan Bay in 2007 to
control land-based organic pollutants, such as chemical oxygen demands (COD) (Chang et al., 2012). More recently, the second TPLMS
was applied to Gyeonggi Bay (Lake Sihwa) in 2013, targeting good
water quality in terms of COD and total phosphorus (Lee et al., 2014).
A third TPLMS is planned for Ulsan Bay in 2017, mainly targeting the
control of heavy metal pollution in this region, including neighboring
Onsan Bay, which is highly industrialized for non-ferrous metal
processing. Gwangyang and Jinhae bays are surrounded by narrow industrialized areas and broad rural areas. The inner half of Gwangyang
Bay was designated as an SMA, with the management plan being
established in 2005. The Yeongsan River Estuary is characterized as a
rural area, mostly surrounded by agricultural land and numerous
islands to the west.
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J. Ryu et al. / Science of the Total Environment 541 (2016) 1161–1171
Fig. 1. Map showing the location of six coastal areas in Korea. The map also presents information on the sampling year, number of locations, target sedimentary parameters, surrounding
activities, and current management regime.
Table 1
Summary of benthic indices with information about the input parameters, associated parameters, algorithms, and remarks.
Biotic indices
Ecological variable
Species abundance (A)
Number of species (S)
A/S
Ecological index
Simpson's diversity index (1-λ)
Margalef's richness index (d)
Estimated species in 50 indiv.
(ES50)
Pielou's evenness index (J′)
Shannon-Wiener diversity index
(H′)
Taxonomic distinctness (delta+)
Input
parameters
Associated Algorithms
parameters
S
S
S, H’
S
Δ+ = {∑∑i b jωij} / {s(s − 1) / 2}
ES50
AMBI = {(0 × %GI) + (1.5 × %GII) +
(3 × %GIII)
+(4.5 × %GIV) + (6 × %GV)} / 100
BPI = {1 − (a × N1 + b × N2 +
c × N3 + d × N4)
/ (N1 + N2 + N3 + N4) / d} × 100
BQI = {∑(Ai / Total A) × ES(50)0.05i} × 10log(S +
BPI
EQR
M-AMBI
N: total number of individuals.
A, S
A, S, 1-λ,
AMBI
AMBI, H’, S
1-λ = 1 − N(N − 1) / ∑n(n − 1)
d = (S − 1) / ln(n)
ES50 = 1 − ∑{((N − Ni)!(N − 50)!) /
(N − Ni − 50)!N!}
J′ = H′/H′max
H′ = −∑piln(pi)
S
Multivariate index
AMBI
BQI
References
A
S
A/S
A, S
N
N, S
N
Remarks
1)
EQR = {(2 × (1 − (AMBI/7)) + (1-λ′)) / 3}
×{((1 − (1 / A)) + (1 − (1 / S))) / 2}
M-AMBI = K + (a × AMBI) + (b × H’) + (c × S)
Clarke and Warwick
(1998, 1999)
Organic matter
enrichment
considered
Feeding type considered
Borja et al. (2000)
KORDI (1995)
Rosenberg et al.
(2004)
Borja et al. (2004)
Muxika et al. (2007)
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2.2. Sampling and laboratory analyses
Sediments and benthic organisms were collected from 365 locations
in 1995–1998 and analyzed: Gyeonggi Bay (78 locations) in December
1995, Gwangyang Bay (87 locations) in February 1997, Yeongsan
River Estuary (72 locations) in April 1997, Ulsan Bay (51 locations) in
November 1997, Masan Bay (15 locations) and Jinhae Bay (62 locations)
in May 1998 (Fig. 1). The sampling technique was designed according to
the geography and coastal systems under analysis. For instance, sampling was focused in narrow or semi-closed areas and randomly distributed in the open seas (Fig. S1 of the Supplementary Materials (S)). At
each location, replicates of sediment samples were taken using a 0.1
m2 van Veen grab, covering a surface sampling area of 0.2 m2. Surface
sediment was retained for chemical analyses. Macrofauna were
sampled with a 1 mm mesh sieve. The sorted fauna were then fixed in
4% buffered formalin solution and preserved in 70% ethanol for species
identification and counting. Taxa were identified to the species level,
using a dissecting microscope and an optical microscope where
necessary.
For sediment parameters, sediment grain size was analyzed using a
standard dry sieve (Ingram, 1971) and pipette method (McBride,
1971). Total organic carbon (TOC) of the sediments was estimated by
the Walkley–Black titration method (McBride, 1971). Ten heavy metals
in the sediments were measured using a Perkin Elmer 3100 flame
Atomic Absorption Spectrometer (Norwalk, CT) after digestion with a
mixed solution of acids (Kitano and Fujiyoshi, 1980), comprising concentrated nitric acid (HNO3, 4 mL), hydrofluoric acid (HF, 4 mL) and
perchloric acid (HClO4, 2 mL). Precision and accuracy were validated
using a certified standard reference material (SRM) NIST-1646a (estuarine sediment). Concentrations obtained for the SRM (n = 3) were
within the 95% confidence interval of certified values, except for Mn
and Pb. The relative standard deviations of the measured values for all
analytes were within 10%, except for Pb (~40%). There was no sign of
contamination in the analysis with b0.5% metal concentrations in the
blanks (n = 5) relative to those in the SRM..
Heavy metal pollution was expressed as concentrations and/or
target hazard quotients (HQmetal), depending on the purpose (Eq. (1)).
HQ metal ¼ Σ SHC=SQG
ð1Þ
where, SHC is the heavy metal concentration of the sediments and
SQG is the sediment quality guideline (Cd: 0.75 mg kg− 1; Cr:
116 mg kg−1; Cu: 20.6 mg kg−1; Ni: 47.2 mg kg−1; Pb: 44.0 mg kg−1;
Zn: 68.4 mg kg−1 for Korean Threshold Effects Level (TEL); Mn:
460 mg kg−1 for Wisconsin TEL) (MOF, 2013; WDNR, 2003). The
HQmetal value was calculated as the sum of all risk factors (SHC/
SQG N 1) for heavy metals in the sediment.
2.3. Data analysis
To compare environmental conditions and gradients over the six
study areas, principal component analysis (PCA) was used. All sampling
locations were placed in the 2-dimensional ordination plane with the
first two principal component axes with respect to nine environmental
variables (mud content and 8 heavy metals). Data on environmental
variables were transformed with arcsine (√ x) for mud content and
with ln (x + 1) for heavy metals for the normality (Zar, 1984). PCA
was examined using SPSS 12.0.
A total of 14 ecological indices were selected to analyze the benthic
community. The ecological indices were categorized into three groups
based on their characteristics; specifically three variables, six simple
indices, and five multivariate indices (Table 1). The fundamental variables included total species abundance (A, density), total number of
species (S), and A/S (abundance/species ratio). The second group
included the Simpson diversity index (1-λ), the Margalef richness
index (d), the Hurlbert index (ES 50; expected number of species in a
random sample of 50 individuals), the Pielou evenness index (J′), the
Shannon–Wiener diversity index (H′; natural log), and taxonomic
distinctness (delta+). The third group included the Azti Marine Biotic
Index (AMBI), the Benthic Pollution Index (BPI), the Benthic Quality
Index (BQI), the Ecological Quality Ratio (EQR; calculated according to
the UK MBITT multimetric approach), and the M-AMBI. Table 1 provides
a summary of each index, with information about the input parameters,
associated parameters, algorithms, and additional remarks. More details
about the multivariate indices are provided previous publications
(Blanchet et al., 2008; KORDI, 1995; Labrune et al., 2006; Quintino
et al., 2006).
After calculating the stated suite of indices for each region, the
resulting matrix was submitted to an ordination analysis, such as nonmetric multidimensional scaling (NMDS). NMDS was used to explore
similarities and differences in indices behavior within each area.
Similarity was calculated using Bray–Curtis similarity coefficients with
indices data log transformed and standardized. Pair-wise comparisons
for significant differences in indices composition between areas were
Table 2
Summary of the six data sets used in this study: benthos and sedimentary environment.
Sampling
Date # of locations
Benthos data
Number of species
Density (ind. m−2)
Sediment data
Mud content
TOC (%)
Metals
Al (%)
Fe (%)
Mn (mg kg−1)
Cr (mg kg−1)
Co (mg kg−1)
Cu (mg kg−1)
Ni (mg kg−1)
Zn (mg kg−1)
Pb (mg kg−1)
Cd (mg kg−1)
a
b
Gyeonggi Bay
Yeongsan River estuary
Gwangyang Bay
Masan Bay
Jinhae Bay
Ulsan Bay
Dec 1995
78
Apr 1997
72
Feb 1997
87
May 1998
15
May 1998
62
Nov 1997
51
78
570
205
241
295
875
28
182
225
991
117
535
1.5–97 (49 ± 30)a
0.0–1.2 (0.3 ± 0.2)
15–100 (88 ± 22)
nab
21–100 (86 ± 20)
0.4–2.0 (1.2 ± 0.4)
43–98 (84 ± 20)
0.8–4.1 (1.8 ± 0.8)
46–99 (94 ± 8.4)
na
35–100 (87 ± 16)
0.1–6.9 (1.8 ± 1.5)
3.1–8.0 (6.2 ± 1.0)
1.0–4.2 (2.4 ± 0.6)
200–2100 (510 ± 220)
24–360 (69 ± 42)
6.4–22 (14 ± 3.2)
1.4–510 (66 ± 25)
9.7–110 (25 ± 13)
31–540 (91 ± 83)
na
na
3.8–8.5 (7.0 ± 1.0)
1.4–4.4 (3.2 ± 0.6)
410–970 (640 ± 140)
18–83 (60 ± 13)
4.6–16 (12 ± 2.3)
6.4–27 (19 ± 4.6)
8.6–37 (25 ± 6.0)
25–100 (73 ± 16)
18–27 (24 ± 2.0)
0.1–0.4 (0.2 ± 0.05)
2.3–10 (8.2 ± 1.4)
1.4–5.0 (3.8 ± 0.7)
310–1500 (920 ± 230)
26–93 (68 ± 14)
8.0–17 (13 ± 1.8)
8.0–44 (19 ± 5.0)
11–42 (33 ± 5.9)
35–180 (96 ± 22)
9.0–770 (36 ± 80)
na
7.4–12 (10 ± 1.2)
3.5–4.7 (4.2 ± 0.3)
470–680 (590 ± 69)
31–110 (68 ± 18)
9.3–16 (14 ± 1.7)
24–160 (97 ± 39)
13–49 (32 ± 7.6)
92–570 (360 ± 140)
24–120 (67 ± 24)
0.2–3.5 (2.0 ± 0.9)
4.4–10 (8.9 ± 0.9)
2.7–4.7 (4.0 ± 0.3)
430–2000 (770 ± 270)
23–82 (58 ± 11)
11–16 (14 ± 1.1)
18–91 (42 ± 12)
22–39 (34 ± 3.5)
67–350 (130 ± 43)
10–69 (28 ± 8.2)
0.2–1.8 (0.6 ± 0.4)
4.8–9.5 (7.5 ± 1.1)
2.1–4.2 (3.4 ± 0.6)
310–730 (482 ± 74)
23–77 (47 ± 13)
9.7–76 (17 ± 10)
26–400 (89 ± 64)
21–55 (35 ± 7.8)
81–480 (170 ± 80)
21–110 (43 ± 16)
0.3–2.0 (0.6 ± 0.3)
Min.–max. (mean ± SD).
na: not analyzed.
J. Ryu et al. / Science of the Total Environment 541 (2016) 1161–1171
1165
Fig. 2. PCA ordination of environmental conditions at sampling locations in six coastal areas of Korea. Locations are marked by area identifiers.
made using Analysis of Similarity (ANOSIM). Similarity percentage
analysis (SIMPER procedure) was used to determine the percent of
dissimilarity of locations and the particular indices responsible for differences between areas. Calculations of all univariate indices, NMDS,
ANOSIM, and SIMPER were performed with the software PRIMER, v6
(Clarke and Gorley, 2006). AMBI and M-AMBI were computed using
AMBI software (http://www.azti.es).
2.4. EcoQ assessment and index performance evaluation
To evaluate index performance to derive ecological quality (EcoQ),
six indices were selected for comparison: one simple index of H′
and well known five multivariate indices of AMBI, BPI, BQI, EQR, and
M-AMBI, for those given the quality thresholds that tentatively suggested in previous papers (Blanchet et al., 2008; KORDI, 1995; Labrune
Fig. 3. MDS ordination results for 14 univariate and multivariate ecological indices and the maximum values of heavy metal hazard quotients (HQmax) in six coastal areas of Korea.
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J. Ryu et al. / Science of the Total Environment 541 (2016) 1161–1171
et al., 2006; Rosenberg et al., 2004; Quintino et al., 2006). The European
Water Framework Directive (WFD) proposed a guideline to assess EcoQ
of water bodies and classify ecological status into five scales (high, good,
moderate, poor, and bad). Here, EcoQ was assessed in each index based
on the five scales as the WFD proposed: “High” if H′ N 4, AMBI ≤ 1.2,
BPI ≥ 60, EQR ≥ 0.80; “Good” if 3 b H′ ≤ 4, 1.2 b AMBI ≤ 3.3,
40 ≤ BPI b 60, 0.65 ≤ EQR b 0.80; “Moderate” if 2 b H′ ≤ 3,
3.3 b AMBI ≤ 4.3, 30 ≤ BPI b 40, 0.43 ≤ EQR b 0.65; “Poor” if 1 b H′ ≤ 2,
4.3 b AMBI ≤ 5.5, 20 ≤ BPI b 30, 0.20 ≤ EQR b 0.43; and “Bad” if H′ ≤ 1,
AMBI N 5.5, BPI b 20, EQR b 0.20 (Blanchet et al., 2008). Conversely,
the EcoQ assessed by BQI was determined by taking the highest BQI
values as a reference value and by defining five classes of equal interval
between 0 and the reference value (Rosenberg et al., 2004). M-AMBI
determines the EcoQ based on pre-selected threshold values estimated
from discriminant analysis, combining AMBI with the Shannon–Wiener
diversity and the number of species (Muxika et al., 2007)..
A non-parametric Wilcoxon paired-sample test was used to assess
(dis)agreement between the indices on the EcoQ status of locations
statistically. A non-parametric Kendall's rank correlation coefficient
between index-derived classifications was calculated and evaluated in
assess whether the different indices displayed a similar tendency in
the EcoQ classification of locations. A detailed description justifying
the use of the Kendall's rank-correlation coefficient is provided by
Blanchet et al. (2008). Kruskal–Wallis analysis was used to evaluate
environmental differences between different EcoQ classes. The variables
used in the analysis were mean grain size, organic carbon content, and
heavy metals in the sediments. All three non-parametric statistical analyses were performed by SPSS 12.0.
3. Results and discussion
All study areas were located in shallow coastal zones of b30 m water
depth. Sediment quality in the bays and adjacent socio-economic activities, such as population, industry and agricultural activities, were
considered to classify the six bays into three groups; specifically, rural
(Yeongsan River Estuary), rural/industry (Gwangyang Bay and Jinhae
Bay), and municipal/industry (Gyeonggi Bay, Masan Bay, and Ulsan
Bay) (Fig. 1). A total of 365 locations in the six bays were examined to
identify the extent to which benthic indices showed (dis)agreement
in assessing ecological integrity. Each area included N 50 locations,
except for the relatively small area of Masan Bay (n = 10 locations);
thus, it was possible to make regional comparison between bays based
on their size and/or geographical distribution. We considered stepwise
analyses, say from general variables to simple and/or multivariate
indices, whether site-specific indices may be used within the framework of an overall benthic quality assessment in the coastal areas of
Korea.
Fig. 4. Percent frequency (%) of ecological quality (EcoQ) status based on six selected benthic indices (AMBI, BPI, BQI, EQR, H′, and M-AMBI) in six coastal areas of Korea..
J. Ryu et al. / Science of the Total Environment 541 (2016) 1161–1171
3.1. General ecological qualities in six Korean coasts
From the entire six study areas, a total of 479 species of benthic
invertebrates were identified. A full list of occurring species in the
study areas are provided in the Table S1. In general, the bottom
sediment in the bays was mostly mud-dominant habitat with N80%
of mud content, on average, except for Gyeonggi Bay (49% mud)
(Table 2). PCA ordination showed environmental gradient between regions, high in Ulsan and Masan Bays, intermediate in Jinhae and
Gwangyang Bays, low in Gyeonggi Bay and Yeongsan River Estuary
(Fig. 2). Despite low average contamination, Gyeonggi Bay showed the
most extremely polluted locations near industrial harbors, such as Incheon North Harbor, known to be highly heavy metal polluted area
(Ryu et al., 2011). The first two principal components accounted for
71.1% of the variability in environmental conditions over the regions,
with 52.3% on axis 1 and 19.8% on axis 2. Zn, Cu, Ni, Co, and mud content
were important determinants of differences between locations along
the first axis, while Mn, Al, and Fe were influential along axis 2
(Table S2). The areas belonging to the industry/municipal regional
group (e.g., Masan and Ulsan bays) were the most contaminated by
heavy metals such as Cu, Zn, and Pb (Khim and Hong, 2014). Areas
with moderate heavy metal pollution were found to be the bays adjacent to the industry/rural areas. Finally, the least heavy metal pollution
was detected in the Yeongsan River Estuary that seemed to be due to the
surrounding rural activities and high tidal currents of west coast of
Korea. Overall, heavy metal contamination tended to reflect the geography and adjacent land use activities.
Macrozoobenthic biodiversity also tended to reflect the geographical
setting and heavy metal pollution gradient between bays. For example,
more benthic species (N200 species) were detected in areas adjacent to
rural activity and/or open sea regions. In comparison, species numbers
declined in the three areas, mostly semi-closed system, with high
municipal activity (b 100 species). Given smaller sampling locations in
Masan Bay compared to those in other areas, low number of species
(n = 28) were observed, but the lowest density of individuals
Table 3
Results of the non-parametric Wilcoxon paired-sample test between biotic indices derived
ecological quality status classification (with the five EcoQ classes defined by the WFD),
without considering tied ranking.
(a) Gyeonggi Bay (n = 78)
AMBI
BPI
BQI
EQR
H’
BQI
EQR
H’
M-AMBI
⁎⁎⁎
ns
⁎⁎⁎
⁎⁎⁎
⁎⁎⁎
⁎⁎⁎
⁎⁎⁎
⁎⁎⁎
⁎⁎⁎
⁎⁎⁎
ns
⁎⁎⁎
⁎
⁎⁎⁎
⁎⁎⁎
AMBI
BPI
BQI
EQR
H’
BPI
BQI
EQR
H’
M-AMBI
⁎⁎⁎
⁎
⁎⁎⁎
ns
⁎⁎⁎
⁎⁎⁎
⁎⁎⁎
⁎⁎
⁎⁎⁎
⁎⁎⁎
⁎⁎⁎
ns
ns
⁎⁎⁎
⁎
(d) Masan Bay (n = 15)
BPI
BQI
EQR
H’
M-AMBI
⁎⁎⁎
⁎
⁎⁎⁎
⁎⁎⁎
⁎⁎⁎
⁎⁎
⁎⁎⁎
⁎⁎⁎
⁎⁎⁎
ns
ns
ns
ns
ns
ns
(e) Jinhae Bay (n = 62)
AMBI
BPI
BQI
EQR
H’
(182 ind. m−2) was also found, reflecting the severe sedimentary pollution in the given area (Khim and Hong, 2014; Khim et al., 1999). In
general, benthic organisms are influenced by sedimentary organic
carbon contents, particularly in the species richness (Hyland et al.,
2005). The smallest number of species of Masan Bay seemed to be associated with great organic carbon contents in sediments (0.8 to 4.1%). In
addition, organic matter including toxic substances are accumulated
greatly in sediments of the Masan Bay compared to the Gyeonggi Bay
and Ulsan Bay, which reflected the general association of benthic community with the geographical setting in the semi-enclosed system
given (Khim and Hong, 2014).
The association of benthic faunal communities with the surrounding
environment was also identified by NMDS analysis (Fig. 3). The MDS
diagram clearly shows certain spatial patterns for ecological indices
where two distinct groups (A and A/S vs. other indices) were consistently found. This trend was particularly strong for the industrial areas
surrounding Gyeonggi, Gwangyang, and Ulsan bays. In general, the
association of A and A/S gradually weakened as rural activities increased
(i.e., as contamination declined). Meantime, certain indices (such as S,
BQI, and AMBI) were dispersed in the rural areas but allocated together
in the industrial and/or municipal areas, where contamination was
greater. Such allocation change between indices was also observed for
certain ecological indices, such as d and ES50, dispersed in rural areas
such as the Yeongsan River Estuary and Jinhae Bay. All diversity indices
(1-λ, J′, H′, and delta+) and certain multivariate indices (BQI, EQR, and
M-AMBI), are located in center in a group and showed close association
(located nearby) across each other. They appeared to be representative
in an integrated manner. Compared to other indices, BPI was independent and/or inconsistent across the study areas. Of note, the NMDS
plotting of ecological indices may not necessarily reflect the degree of
pollution in a given area; rather, it may simply suggest (dis)similarity
between indices. However, the close grouping between indices in
contaminated areas with greater HQmetal, in Gyeonggi, Ulsan, and
Gwangyang Bays, implies potential pollution (Fig. 3).
The similarity analysis (ANOSIM) presented significant differences
between the two areas with a significance level of 0.05, except Ulsan
vs. Masan (R = 0.013, p = 0.405). Apparently 6 areas were found to
be relatively similar in indices variation. This was confirmed by calculation of the percent of dissimilarity between the two areas and the
contribution of specific indices to the very dissimilarity (SIMPER
procedure) (Table S3).
(b) Yeongsan River estuary (n = 72)
BPI
(c) Gwangyang Bay (n = 87)
AMBI
BPI
BQI
EQR
H’
1167
AMBI
BPI
BQI
EQR
H’
BPI
BQI
EQR
H’
M-AMBI
⁎⁎
ns
ns
⁎
⁎⁎
⁎
⁎
⁎⁎
⁎⁎
ns
ns
ns
⁎
⁎⁎
ns
(f) Ulsan Bay (n = 51)
BPI
BQI
EQR
H′
M-AMBI
⁎⁎⁎
ns
⁎⁎
⁎⁎
⁎⁎⁎
⁎⁎
⁎⁎⁎
ns
⁎⁎⁎
ns
ns
ns
ns
ns
⁎
ns: not significant (p N 0.05).
⁎ : Significant (p b 0.05).
⁎⁎ : Very significant (p b 0.01).
⁎⁎⁎ : Highly significant (p b 0.001).
AMBI
BPI
BQI
EQR
H′
BPI
BQI
EQR
H′
M-AMBI
⁎⁎⁎
⁎⁎⁎
⁎⁎⁎
⁎⁎⁎
⁎⁎⁎
⁎⁎⁎
⁎⁎⁎
⁎⁎⁎
⁎⁎⁎
⁎⁎⁎
⁎⁎
⁎
⁎⁎⁎
ns
⁎⁎⁎
3.2. EcoQ classifications
All of the indices used in this study, including multivariate indices,
were useful for identifying the general benthic quality of the selected
study areas. We also selected one ecological index (H′) and five
multivariate indices (AMBI, BPI, BQI, EQR, and M-AMBI) to quantify
their site-specific utility in an ecological quality assessment. The percent
frequency of the selected indices clearly showed regional differences in
EcoQ, with this result being expected from the wide range of sedimentary pollution in the study areas (Fig. 4). Overall, the EcoQ results
reflected the degree of pollution and nearby land use activity, with
slight variation in patterns. Masan Bay had the lowest EcoQ status,
with the greatest proportion of “Poor” to “Bad” quality locations
(48%). This result was reflected in this site also having the smallest
species numbers and abundance (Table 2). Yeongsan River Estuary
had the healthiest benthic community, with N 50% of locations being of
“High” to “Good” quality.
Out of the six indices, the BPI seemed to be the most tolerant index
with N 90% of locations being classified as “High” to “Good,” followed
by AMBI (76%), M-AMBI (60%), and EQR (56%). More than 50% of locations were classified as a single specific EcoQ status for several indices,
such as AMBI (72% “Good”), BPI (63% “High’), and M-AMBI (55%
“Good”). This result indicates that these indices have relatively weaker
resolution in classifying the specific range of EcoQ status. However,
1168
J. Ryu et al. / Science of the Total Environment 541 (2016) 1161–1171
Table 4
Results of the non-parametric Kendall's rank correlation coefficient test between biotic indices-derived ecological quality (EcoQ) status classifications.
(a) Gyeonggi Bay (n = 78)
AMBI
BPI
BQI
EQR
H′
(b) Yeongsan River estuary (n = 72)
BPI
BQI
EQR
H’
M-AMBI
ns
ns
ns
0.632⁎⁎⁎
ns
0.529⁎⁎⁎
0.460⁎⁎⁎
ns
0.635⁎⁎⁎
0.686⁎⁎⁎
0.425⁎⁎⁎
ns
0.660⁎⁎⁎
0.627⁎⁎⁎
0.707⁎⁎⁎
(c) Gwangyang Bay (n = 87)
AMBI
BPI
BQI
EQR
H′
BPI
BQI
EQR
H′
M-AMBI
0.306⁎⁎
ns
ns
0.453⁎⁎⁎
0.230⁎
ns
ns
ns
0.382⁎⁎⁎
0.526⁎⁎⁎
ns
0.287⁎
0.392⁎⁎⁎
0.576⁎⁎⁎
0.681⁎⁎⁎
(d) Masan Bay (n = 15)
BPI
BQI
EQR
H′
M-AMBI
0.693⁎⁎⁎
0.273⁎⁎
0.256⁎⁎
0.749⁎⁎⁎
0.691⁎⁎⁎
0.368⁎⁎⁎
0.565⁎⁎⁎
0.517⁎⁎⁎
0.470⁎⁎⁎
0.704⁎⁎⁎
0.706⁎⁎⁎
0.604⁎⁎⁎
0.526⁎⁎⁎
0.778⁎⁎⁎
0.779⁎⁎⁎
(e) Jinhae Bay (n = 62)
AMBI
BPI
BQI
EQR
H′
AMBI
BPI
BQI
EQR
H’
AMBI
BPI
BQI
EQR
H′
BPI
BQI
EQR
H′
M-AMBI
0.850⁎⁎⁎
−0.652⁎⁎
−0.696⁎⁎
ns
ns
0.611⁎⁎
−0.556⁎
−0.636⁎⁎
0.767⁎⁎
0.733⁎⁎
−0.581⁎
−0.577⁎
0.905⁎⁎⁎
0.719⁎⁎
0.832⁎⁎⁎
(f) Ulsan Bay (n = 51)
BPI
BQI
EQR
H′
M-AMBI
0.375⁎⁎
0.490⁎⁎⁎
ns
0.673⁎⁎⁎
0.302⁎
0.746⁎⁎⁎
0.570⁎⁎⁎
ns
0.730⁎⁎⁎
0.853⁎⁎⁎
0.672⁎⁎⁎
0.352⁎⁎
0.739⁎⁎⁎
0.845⁎⁎⁎
0.908⁎⁎⁎
AMBI
BPI
BQI
EQR
BPI
BQI
EQR
H′
M-AMBI
0.260⁎
0.272⁎
ns
0.566⁎⁎⁎
0.296⁎
0.533⁎⁎⁎
0.325⁎⁎
ns
0.550⁎⁎⁎
0.654⁎⁎⁎
0.320⁎
ns
0.648⁎⁎⁎
0.736⁎⁎⁎
0.831⁎⁎⁎
H′
ns: not significant (p N 0.05).
⁎ : Significant (p b 0.05).
⁎⁎ : Very significant (p b 0.01).
⁎⁎⁎ : Highly significant (p b 0.001).
the EcoQ across locations tended to be comparable within a given area,
regardless of all selected indices. Overall, the EQR provided the clearest
classification (see Masan and Yeongsan cases) across the range of EcoQ
status (Fig. 4). Therefore, at present, EQR appears to present an appropriate index for regional grouping and/or the comparison of benthic
quality assessments.
The WFD establishes a framework for the protection and improvement of all European surface and ground waters. Its final objective is
to achieve at least ‘good water status’ for all water bodies by the year
2015. The WFD provides a guideline to assess ecological quality status
based on EQR, including biological, hydromorphological, and physicochemical quality elements (Borja et al., 2007). Similar to this effort,
the Korean government proposed the Marine Ecological Quality
Map (MEQM) in 2014 based on a great amount of monitoring data, classifying ecological quality of coastal water bodies into three classes (I, II,
& III). Four criteria have been considered to the Korean EcoQ assessment, such as 1) endangered species, 2) ecological superiority (DO of
bottom water, sediment pollution, biomass and ecological index of
macrozoobenthos, harmful algae, and phytoplankton density), 3) biodiversity, and 4) designation of marine protected areas. However, assessment criteria for the first MEQM failed to be accepted with respect to
scientific consensus and conflict with other legislation, accordingly the
management objectives have been pending at present. Taking into
account great amount of work to be carried out in the WFD process,
Fig. 5. Results of the non-parametric Kruskal–Wallis test and Pearson correlation to determine the relationship between environmental parameters and EcoQ status in six coastal areas of
Korea.
J. Ryu et al. / Science of the Total Environment 541 (2016) 1161–1171
1169
Fig. 6. Proportion of ecological quality (EcoQ) status against the degree of heavy metal hazard quotients (ΣHQmetal) in six coastal areas of Korea.
the Korean MEQM needs further revision process, including
complimentary researches, to achieve wide agreement from scientific
community as well as managers with long-term perspectives.
3.3. Agreement and disagreement between ecological indices
The (dis)similarity between indices was shown by the regional
assessment of EcoQ. Thus it might be necessary to address site-specific
(dis)agreement across the selected indices. The non-parametric
Wilcoxon paired-sample test showed that, there was significant
disagreement between indices across (Table 3). In particular, the EcoQ
significantly disagreed in Ulsan Bay, except BQI vs. H′. Gyeonggi Bay
and Yeongsan River Estuary generally showed disagreement between
indices, except for two (AMBI vs. BQI and AMBI vs. M-AMBI for
Gyeonggi Bay) and three (AMBI vs. EQR, BQI vs. EQR, and BQI vs. MAMBI for Yeongsan River Estuary) cases, respectively. Jinhae Bay
showed the best agreement between indices, with no significant
disagreement for seven cases of correlation out of 15 combinations,
indicating the least variable index among tested. Gwangyang and
Masan bays had the second best agreement between indices, with six
cases significantly agreeing. The BQI and M-AMBI were found to be
the most widely comparable indices in relation to all other indices in
these areas, warranting lesser sensitive indices.
Most indices showed significant rank correlations (Kendall) with
one another, except for the BPI (Table 4). This result indicates that
rank-based regional classification based on AMBI, BQI, EQR, H′, or M-
AMBI would be valid and reasonable. In particular, all correlations in
Gwangyang Bay were significant. The observed significant rank
correlation may be explained by “rank-shrinking” between indices.
For instance, Gwangyang locations that were broadly classified as
“High” to “Bad” by BQI and H′ were narrowed down to mostly “Good”
to “Moderate” or “Poor” by AMBI and M-AMBI (Fig. 4). Another explanation is the “rank-shift” phenomenon. For instance, the Gwangyang
locations that were mostly classified as “High” or “Good” to “Moderate”
by BPI or AMBI were delineated as “Good” to “Poor” by M-AMBI. However, significant disagreement was detected between BQI vs. AMBI, BPI
vs. M-AMBI, and AMBI vs. M-AMBI (Table 3) from the paired-sample
tests. Thus, it might be important to select appropriate indices or
examine their relationships depending on the purpose of a given
comparative assessment for regional EcoQ in management (Blanchet
et al., 2008).
3.4. Relationship between ecological indices and metal pollutions
Regional variation in EcoQ classification and/or evidence of (dis)agreement between indices may arise in coastal ecosystems because
such systems are subject to continuous environmental changes
(Blanchet et al., 2008; Labrune et al., 2006; Quintino et al., 2006). Strong
association of such environmental changes to faunal responses would
not be exception in the benthic environment, in particular certain
sedimentary properties, such as mud or organic content, play a key
role for macrofaunal distribution. Pollution may be a key factor
1170
J. Ryu et al. / Science of the Total Environment 541 (2016) 1161–1171
Fig. 7. Spatial distribution of ecological quality (EcoQ) status classes and heavy metal hazard quotients (ΣHQmetal) values in six coastal areas of Korea.
controlling the health of the benthic community, particularly as pollutants tended to accumulate and sink to the bottom sediment layer (Ryu
et al., 2011). To determine the relationship between environmental
parameters and EcoQ status, we performed both non-parametric
Kruskal–Wallis test and Pearson correlation analysis (Fig. 5 and
Table S4). We found that mud content and heavy metal concentration
were significantly associated with EcoQ class, particularly in major
industrial areas (e.g., Gyeonggi and Ulsan bays). Interestingly, at least
two indices, among six tested, were significantly associated with
environmental parameters in each area, meantime some parameters
(Fe, Mn, Cr, and Zn) were consistently associated with all six indices.
However, the degree and spectrum of these associations differed between two statistics. In general, the Kruskal–Wallis test was more strict
(less sensitive), because it considers the rank-based EcoQ status.
Among the six indices, the M-AMBI had the best fit with the EcoQ
status for the tested environmental parameters with respect to region.
Specifically, five of the six areas showed relatively high associations.
However, the high proportion of strong associations might overestimate
the specific association between EcoQ status and environmental condition; consequently, M-AMBI may not represent the most appropriate
index. For example, the smallest heavy metal concentrations were
found in Yeongsan River Estuary; yet, a strong association to EcoQ status
was detected here. In comparison, the Masan Bay locations had relatively high and varying heavy metal concentrations, but with low correlations. This inconsistency between raw-data and statistical results
would be masked by the other components and/or parameters, such
as hypoxia, eutrophication, or trace organic contamination. Despite
this issue, several heavy metals seemed to be strongly associated with
EcoQ status, regardless of index. Significant metals for all six indices
were Fe, Mn, Cr, and Zn in Gyeonggi Bay, Mn, Cr, and Zn in Gwangyang
Bay, and Mn and Cr in Jinhae Bay.
To investigate how heavy metals are associated with EcoQ status, the
proportion of EcoQ status against the degree of ΣHQmetal was examined
in each area (Fig. 6). As expected, Gyeonggi (EQR and M-AMBI) and
Ulsan (BQI and EQR) bays showed a proportional gradient between
these two parameters, supporting the Kruskal–Wallis test results. This
result indicates that the EQR reflects the general pollution gradient of
heavy metals, facilitating the effective separation of locations based on
pollution status by each index (Fig. 4). EQR and ΣHQmetal was also
spatially associated in Gyeonggi and Ulsan bays, but not in any of the
other areas (Fig. 7). In general, the EQR seemed to be more powerful
for assessing hot spot locations and/or the spatial gradient of pollution
in the study areas. Overall, this study demonstrated that the application
of varying ecological indices was useful for quantifying ecological status
in relation to sedimentary pollution in each area. In conclusion, we
confirm that single or limited indices may over- or underestimate the
ecological status of marine areas and thus strongly recommend the
use of site-specific indices to specific areas and/or locations for objective
pollution assessments.
Acknowledgments
This work was supported by the projects entitled “Oil spill
Environmental Impact Assessment and Environmental Restoration
(2009-0001)”, “Integrated Management of Marine Environment
and Ecosystems Around Saemangeum (2014-0257)”, and “Development of Integrated Estuarine Management System (2014-0431)”
funded by the Ministry of Oceans and Fisheries of Korea (MOF)
granted to JR and JSK, and “Development of Techniques for Assessment and Management of Hazardous Chemicals in the Marine Environment (2014-0342)” funded by the MOF given to JSK.
Appendix A. Supplementary data
Supplementary data to this article can be found online at http://dx.
doi.org/10.1016/j.scitotenv.2015.10.016.
J. Ryu et al. / Science of the Total Environment 541 (2016) 1161–1171
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gradient in the southern Baltic sea. Mar. Pollut. Bull. 55, 258–270.
Appendix A. Supplementary data
Table S1. List of marine benthic invertebrates from six Korean coasts. The number of species
belonging to each phylum and class given in parenthesis.
Phylum Cnidaria (22)
Class Anthozoa (22)
Order Actiniaria
Family Actiniidae
Anthopleura kurogane
Anthopleura nigrescens
Dofleinia armata
Epiactis japonica
Epiactis sp.
Paracondylactis hertwigi
Order Pennatulacea
Family Pennatulidae
Pennatula sp.
Phylum Nemertina (8)
Class Anopla (8)
Order Heteronemertea
Family Lineidae
Euborlasia sp.
Lineus fuscoviridis
Lineus sp.1
Lineus sp.2
Lineus sp.3
Lineus sp.4
Micrura sp.
Family Valenciniidae
Baseodiscus sp.
Phylum Brachiopoda (4)
Class Rhynchonellata (4)
Order Terebellida
Family Dallinidae
Campages mariæ
Family Terebrataliidae
Coptothyris grayi
Terebratalia coreanica
Order Rhynchonellida
Family Hemithirididae
Hemithiris psittacea
Phylum Sipuncula (10)
Class Phascolocomatidea (8)
Order Aspidosiphonida
Family Aspidosiphonidae
Aspidosiphon angulatus
Aspidosiphon sp.
Order Mesogastropoda
Family Phascolosomatidae
Phascolosoma albolineatum
Phascolosoma japonicum
Phascolosoma kurilens
Phascolosoma onomichianumi
Phascolosoma scolops
Phascolosoma sp.
Class Phascolocomatidea (2)
Order Golfingiida
Family Golfingiidae
Golfingia sp.
Family Themistidae
Dendrostomum sp.
Phylum Mollusca (75)
Class Polyplacophora (2)
Order Chitonida
Family Ischnochitonidae
Lepidozona iyoensis
Order Lepidopleurida
Family Leptochitonidae
Lepidopleura sp.
Class Gastropoda (12)
Order Cephalaspidea
Family Cylichnidae
Adamnestia japonica
Order Caenogastropoda
Family Potamididae
Cerithidea rhizophorarum
Order Cephalaspidea
Family Aglajidae
Philinopsis speciosa
Family Philinidae
Philine orientalis
Order Littorinimorpha
Family Calyptraeidae
Crepidula onyx
Family Naticidae
Lunatia fortunei
Neverita didyma
Order Neogastropoda
Family Terebridae
Hastula sp.
Family Nessariidae
Nassarius castus
Nassarius sulfflatus
Family Buccinidae
Volutharpa ampullacea
Order Vetigastropoda
Family Fissurellidae
Puncturella nobilis
Class Bivalvia (60)
Order Anomalodesmata
Puncturella nobilis
Order Anomalodesmata
Family Lyonsiidae
Agriodesma navicula
Lyonsia ventricosa
Order Arcoida
Table S1. (continued).
Family Arcidae
Anadara broughtonii
Anadara inaequivalvis
Anadara sativa
Arca boucardi
Family Glycymerididae
Glycymeris munda
Family Parallelodontidae
Porterius dalli
Family Noetiidae
Striarca symmetrica
Order Euheterodonta
Family Hiatellidae
Hiatella arctica
Panopea japonica
Family Pharidae
Phaxas attenuatus
Siliqua pulchella
Order Lucinoida
Family Lucinidae
Lucinoma annulata
Pillucina striata
Order Myoida
Family Corbulidae
Potamocorbula amurensis
Order Nuculanoida
Family Yoldiidae
Yoldia seminuda
Yoldia similis
Order Nuculida
Family Nuculidae
Acila divaricata
Order Pectinoida
Family Pectinidae
Chlamys nobilis
Order Pterioida
Family Pinnidae
Atrina pectinata
Order Veneroida
Family Cardiidae
Fulvia mutica
Laevicardium undatopictum
Family Kelliidae
Kellia porculus
Family Mactridae
Mactromeris polynyma
Family Mytilidae
Arcuatula senhousia
Family Semelidae
Theora lata
Family Tellindae
Cadella lubrica
Ciliatocardium ciliatum
Gorbraeus kazusensis
Heteromacoma irus
Macoma incongrua
Macoma praetexta
Macoma sectior
Macoma tokyoensis
Megangulus sp.
Moerella jedoensis
Moerella rutila
Pharaonella iridella
Tellina hokkaidoensis
Tellina iridella
Tellina sp.
Tellina venulosa
Tellina vestalioides
Nitidotellina nitidula
Family Ungulinidae
Cycladicama cumingii
Diplodonta sowerbyi
Felaniella usta
Family Veneridae
Dosinorbis troscheli
Glycydonta marcia
Leukoma jedoensis
Mercenaria stimpsoni
Meretrix lamarckii
Paphia undulata
Perglypta fischeri
Ruditapes philippinarum
Ruditapes variegatus
Saxidomus purpurata
Venus cassinaeformis
Class Cephalopoda (1)
Order Octopoda
Family Octopodidae
Octopus minor
Phylum Annelida (150)
Class Polychaeta (150)
Order Amphinomida
Family Amphinomidae
Amphinome sp.
Order Canalipalpata
Family Chaetopteridae
Chaetopterus sp.
Order Capitellida
Family Arenicolidae
Abarenicola sp.
Family Capitellidae
Capitella capitata
Heteromastus filiformis
Heteromastus sp.
Mediomastus sp.
Notomastus sp.
Family Maldanidae
Axiothella sp.
Table S1. (continued).
Clymenella koreana
Clymenella sp.
Maldane sp.
Praxillella affinis
Unidentified
Order Cossurida
Family Cossuridae
Cossura sp.
Order Echiuroidea
Family Echiuridae
Anelassorhynchus mucosus
Anelassorhynchus sabinus
Family Urechidae
Urechis chilensis
Urechis sp.
Order Euheterodonta
Family Pharidae
Cultrensis attenuatus
Order Eunicida
Family Dorvilleidae
Dorvillea sp.
Parougia caeca
Family Eunicidae
Leodice antennata
Marphysa sanguinea
Unidentified
Family Lumbrineridae
Lumbrineris heteropoda
Lumbrineris japonica
Lumbrineris latreilli
Lumbrineris longifolia
Lumbrineris nipponica
Family Oenonidae
Arabella iricolor
Unidentified
Family Onuphidae
Diopatra sugokai
Nothria sp.
Order Opheliida
Family Opheliidae
Armandia lanceolata
Leitoscoloplos pugettensis
Ophelina acuminata
Phylo felix asiaticus
Phylo fimbriata
Phylo sp.
Unidentified
Family Paraonidae
Aricidea cerrutii
Aricidea horikoshii
Aricidea sp.
Unidentified
Family Scalibregmatidae
Oncoscolex sp.
Travisia sp.
Unidentified
Order Phyllodocida
Family Aphroditidae
Unidentified
Family Glyceridae
Glycera chirori
Glycera sp.
Glycera unicornis
Unidentified
Family Goniadidae
Glycinde sp.
Goniada maculata
Goniada sp.
Family Hesionidae
Oxydromus sp.
Family Nephtyidae
Aglaophamus sinensis
Aglaophamus sp.
Inermonephtys inermis
Neanthes sp.
Nectoneanthes oxypoda
Nectoneanthes sp.
Nephtys caeca
Nephtys ciliata
Nephtys longosetosa
Nephtys oligobranchia
Nephtys polybranchia
Nephtys sp.
Nereis sp.
Perinereis sp.
Pseudonereis sp.
Tambalagamia sp.
Unidentified
Family Phyllodocidae
Eteone sp.
Eulalia sp.
Phyllodoce koreana
Phyllodoce sp.
Unidentified
Family Pilargidae
Sigambra hanaokai
Unidentified
Family Polynoidae
Lepidasthenia sp.
Unidentified
Family Sigalionidae
Unidentified
Family Syllidae
Syllis elongata
Syllis sp.
Unidentified
Order Sabellida
Family Sabellidae
Table S1. (continued).
Chone infundibuliformis
Chone sp.
Euchone sp.
Hydroides ezoensis
Hydroides sp.
Lygdamis giardi
Pseudopotamilla occelata
Pseudopotamilla sp.
Sabella sp.
Spirobranchus sp.
Unidentified
Order Spionida
Family Longosomatidae
Heterospio sp.
Family Magelonidae
Magelona japonica
Magelona sp.
Family Poecilochaetidae
Poecilochaetus johnsoni
Family Spionidae
Dispio sp.
Laonice cirrata
Paraprionospio pinnata
Polydora sp.
Pseudopolydora sp.
Prionospio sp.
Prionospio pinnata
Pygospio sp.
Spiophanes sp.
Unidentified
Order Terebellida
Family Ampharetidae
Amage auricula
Amage sp.
Ampharete sp.
Amphicteis gunneri
Amphicteis sp.
Amphisamytha japonica
Amphisamytha sp.
Melinna cristata
Melinna elisabethae
Melinna sp.
Family Cirratulidae
Chaetozone sp.
Cirratulus cirratus
Cirratulus sp.
Cirriformia sp.
Cirriformia tentaculata
Tharyx sp.
Unidentified
Family Flabelligeridae
Brada villosa
Daylithos parmatus
Pherusa plumosa
Family Pectinariidae
Amphictene japonica
Lagis bocki
Unidentified
Family Sternaspidae
Sternaspis scutata
Family Terebellidae
Amphitrite edwardsii
Amphitrite sp.
Loimia medusa
Pista cristata
Unidentified
Family Trichobranchidae
Terebellides horikoshii
Terebellides sp.
Trichobranchus sp.
Unidentified
Phylum Arthropoda (156)
Class Malacostraca (152)
Order Amphipoda
Family Ampeliscidae
Ampelisca brevicornis
Ampelisca cyclops
Ampelisca diadema
Ampelisca misakiensis
Ampelisca sp.
Byblis japonicus
Family Ampithoidae
Ampithoe lacertosa
Ampithoe sp.1
Ampithoe sp.2
Family Aoroidea
Grandidierella sp.1
Grandidierella sp.2
Family Caprellidae
Caprella acanthogaster
Caprella sp.
Family Eriopisidae
Eriopisella sechellensis
Family Isaeidae
Eurystheus sp.
Family Ischyroceridae
Cerapus tubularis
Ericthonius pugnax
Ericthonius sp.
Jassa falcata
Jassa sp.
Family Kamakidae
Kamaka kuthae
Kamaka sp.
Family Leucothoidae
Leucothoe sp.1
Leucothoe sp.2
Family Liljeborgiidae
Table S1. (continued).
Liljeborgia japonica
Liljeborgia sp.
Family Lysianassidae
Orchomene sp.
Family Maeridae
Maera sp.
Maeropsis cobia
Family Melitidae
Melita dentata
Melita koreana
Melita sp.1
Melita sp.2
Family Ochlesidae
Odius sp.
Family Oedicerotidae
Monoculodes sp.1
Monoculodes sp.2
Monoculodes sp.3
Pontocrates sp.
Family Photidae
Gammaropsis japonica
Gammaropsis sp.1
Gammaropsis sp.2
Gammaropsis utinomii
Photis longicaudata
Photis sp.1
Photis sp.2
Family Phoxocephalidae
Mandibulophoxus sp.
Family Stegocephalidae
Stegocephaloides sp.
Family Stenothoidae
Stenothoe sp.
Family Urothoidae
Urothoe sp.1
Urothoe sp.2
Order Cumacea
Family Bodotriidae
Bodotria similis
Eocuma hilgendorfi
Eocuma latum
Eocuma sp.
Iphinoe sagamiensis
Sympodomma diomedeae
Family Diastylidae
Diastylopsis sp.
Dimorphostylis sp.1
Dimorphostylis sp.2
Dimorphostylis valida
Paradiastylis longipes
Family Lampropidae
Lamprops sarsi
Family Leuconidae
Nippoleucon enoshimensis
Family Nannastacidae
Nannastacus sp.
Raphidopus sp.
Scherocumella japonica
Order Decapoda
Family Alpheidae
Alpheus bisincisus
Alpheus brevicristata
Alpheus brevicristatus
Alpheus japonicus
Alpheus rapax
Alpheus sp.1
Alpheus sp.2
Family Camptandriidae
Camptandrium sexdentatum
Family Chasmocarcinidae
Chasmocarcinops sp.
Family Corophiidae
Corophium japonica
Corophium sp.1
Corophium sp.2
Corophium uenoi
Crassicorophium crassicorne
Family Crangonidae
Crangon affinis
Family Diogenidae
Dardanus sp.
Diogenes edwardsii
Diogenes sp.
Paguristes ortmanni
Nobilum japonicum japonicum
Nobilum sp.
Paradorippe sp.
Family Epialtidae
Huenia sp.
Family Euryplacidae
Eucrate crenata
Eucrate sp.
Heteroplax dentata
Heteroplax sp.
Family Goneplacidae
Carcinoplax longimana
Carcinoplax sp.
Carcinoplax vestita
Goneplax sp.
Family Hexapodidae
Hexapus anfractus
Family Hippolytidae
Latreutes planirostris
Latreutes sp.
Lysmata vittata
Family Inachidae
Achaeus japonicus
Family Inachoididae
Table S1. (continued).
Pyromaia tuberculata
Family Leucosiidae
Philyra pisum
Family Macrophthalmidae
Macrophthalmus japonicus
Tritodynamia horvathi
Tritodynamia intermedia
Tritodynamia longipropoda
Tritodynamia rathbunae
Tritodynamia sp.
Family Ogyrididae
Ogyrides orientalis
Family Palicidae
Parapalicus sp.
Family Pandalidae
Pandalus danae
Family Pasiphaeidae
Leptochela aculeocaudata
Leptochela gracilis
Leptochela sp.
Family Penaeidae
Metapenaeopsis sp.
Family Pilumnidae
Pilumnopeus makianus
Typhlocarcinus sp.
Family Pinnotheridae
Pinnixa penultipedalis
Pinnixa sp.
Pinnixa tumida
Pinnotheres pholadis
Porcellana sp.
Raphidopus ciliatus
Family Portunidae
Charybdis bimaculata
Charybdis japonica
Thalamita prymna
Thalamita sima
Family Sesarmidae
Nanosesarma gordoni
Family Upogebiidae
Upogebia major
Family Varunidae
Sestrostoma balssi
Family Xenophthalmidae
Xenophthalmus pinnotheroides
Order Euphausiacea
Family Euphausiidae
Thysanoessa longipes
Order Isopoda
Family Anthuridae
Cyathura sp.
Family Chaetiliidae
Symmius caudatus
Family Cirolanidae
Cirolana harfordi
Metacirolana japonica
Natatolana japonensis
Family Holognathidae
Cleantioides japonica
Cleantioides sp.
Family Idoteidae
Cleantiella sp.
Family Paranthuridae
Paranthura japonica
Paranthura sp.
Family Sphaeromatidae
Gnorimosphaeroma ovatum
Order Leptostraca
Family Nebaliidae
Nebalia bipes
Order Stomatopoda
Family Squillidae
Oratosquilla oratoria
Typhlocarcinus sp.
Family Pinnotheridae
Family Tanaididae
Tanais sp.
Class Maxillopoda (3)
Order Sessilia
Family Balanidae
Balanus sp.
Balanus trigonus
Unidentified
Class Pycnogonida (1)
Order Pantopoda
Family Ascorhynchidae
Ascorhynchus auchenicus
Phylum Echinodermata (44)
Class Asteroidea (2)
Order Forcipulatida
Family Asteriidae
Distolasterias sp.
Order Valvatida
Family Asterinidae
Aquilonastra batheri
Class Crinoidea (1)
Order Comatulida
Family Antedonidae
Antedon serrata
Class Echinoidea (4)
Order Camarodonta
Family Temnopleuridae
Temnopleurus hardwickii
Temnopleurus toreumaticus
Order Spatangoida
Family Schizasteridae
Brisaster owstoni
Schizaster lacunosus
Table S1. (continued).
Class Holothuroidea (9)
Order Apodida
Family Synaptidae
Protankyra bidentata
Order Dendrochirotida
Family Sclerodactylidae
Eupentacta quinquesemita
Family Cucumariidae
Neoamphicyclus problematica
Ocnus sp.
Family Phyllophoridae
Phyllophorus hypsipyrga
Phyllophorus ordinata
Family Sclerodactylidae
Sclerodactyla multipes
Order Molpadida
Family Caudinidae
Caudina similis
Class Ophiuroidea (28)
Order Ophiurida
Family Amphiuridae
Amphiodia craterodmeta
Amphioplus japonicus
Amphipholis sorbrina
Amphipholis sp.
Amphipholis squamata
Amphiura (Fellaria) sinicola
Amphiura aestuarii
Amphiura koreae
Amphiura sinicola
Amphiura sp.
Family Ophiacanthidae
Ophiacantha omoplata
Ophiacantha sp.
Family Ophiactidae
Ophiactis affinis
Ophiactis brachygenys
Ophiactis macrolepidota
Ophiactis profundi
Ophiactis savignyi
Ophiactis sp.
Ophiopholis mirabilis
Family Ophiolepididae
Ophiolepis sp.
Ophiothrix exigua
Ophiothrix sp.
Family Ophiuridae
Ophiura (Ophiuroglypha) kinbergi
Ophiura leptoctenia
Ophiura sarsii
Ophiura sp.
Stegophiura sp.
Unidentified
Phylum Hemichordata (1)
Class Enteropneusta (1)
Order Enteropneusta
Family Ptychoderidae
Balanoglossus sp.
Phylum Chordata (9)
Class Actinopteri (7)
Order Perciformes
Family Gobiidae
Acanthogobius flavimanus
Taenioides cirratus
Class Ascidiacea (2)
Order Pleurogona
Family Molgulidae
Molgula sp.
Order Stolidobranchia
Halocynthia hilgendorfi igaboja
Herdmania mirabilis
Herdmania momus momus
Family Styelidae
Dendrodoa aggregata
Polycarpa maculata
Styela clava clava
Table S2. PCA of environmental conditions in six coastal areas of Korea.
Eigen value
Relative inertia (%)
Cumulative inertia (%)
1
4.706
52.3
52.3
Eigen vectors
Mud content
Al
Cr
Co
Cu
Fe
Mn
Ni
Zn
0.61
0.31
0.46
0.76
0.84
0.44
-0.19
0.81
0.87
PCA axis
2
1.697
18.9
71.1
0.46
0.88
0.40
-0.04
0.09
0.83
0.88
0.39
0.20
Table S3. Comparisons of 14 ecological indices at six coastal areas of Korea. Probabilities resulting from pair-wise analysis of
similarity (ANOSIM) tests for indices similarities between areas are given above the diagonal (shaded). Values on the diagonal are
percent similarity within habitat (SIMPER). Values below the diagonal are percent dissimilarity between areas (SIMPER).
Gyeonggi Bay
87.77%
Yeongsan River
estuary
0.001
Yeongsan River estuary
13.41%
89.39%
0.001
0.002
0.001
0.001
Gwangyang Bay
14.07%
14.03%
86.43%
0.003
0.012
0.001
Masan Bay
16.45%
14.47%
17.42%
85.70%
0.006
0.405
Jinhae Bay
14.01%
13.15%
13.76%
16.82%
86.69%
0.001
Ulsan Bay
15.36%
15.01%
16.02%
16.16%
16.06%
83.76%
Areas
Gyeonggi Bay
Gwangyang Bay
Masan Bay
Jinhae Bay
Ulsan Bay
0.001
0.003
0.001
0.001
Table S4. Results of the non-parametric Kruskal-Wallis test comparing the environmental characteristics of locations between EcoQ
classes derived from the six biotic indices in six coastal areas of Korea.
(a) Gyeonggi Bay (n=78)
MC
LOI
TOC
Al
Fe
Mn
V
Cr
Co
Cu
Ni
Zn
Pb
Cd
As
AMBI
ns
*
*
*
**
*
*
*
ns
**
ns
**
-
-
-
BPI
*
ns
*
ns
*
ns
ns
ns
ns
ns
ns
ns
-
-
-
BQI
ns
ns
ns
ns
ns
ns
ns
ns
ns
ns
ns
ns
-
-
-
EQR
*
***
***
**
***
**
**
***
**
***
**
***
-
-
-
H’
ns
**
**
*
*
*
ns
*
ns
**
ns
**
-
-
-
M-AMBI
ns
*
*
ns
*
ns
ns
*
ns
*
ns
*
-
-
-
Al
Fe
Mn
V
Cr
Co
Cu
Ni
Zn
Pb
Cd
As
ns
(b) Yeongsan River estuary (n=72)
MC
LOI
TOC
AMBI
ns
-
-
ns
ns
ns
-
ns
ns
ns
ns
ns
*
BPI
ns
-
-
ns
ns
ns
-
ns
ns
ns
ns
ns
ns
-
BQI
ns
-
-
ns
ns
ns
-
ns
ns
ns
ns
ns
ns
ns
-
EQR
ns
-
-
ns
*
*
-
ns
**
**
**
ns
ns
*
-
H’
ns
-
-
ns
ns
*
-
ns
*
*
*
ns
**
ns
-
M-AMBI
ns
-
-
*
*
*
-
ns
*
*
*
ns
*
*
-
-
(c) Gwangyang Bay (n=87)
MC
LOI
TOC
Al
Fe
Mn
V
Cr
Co
Cu
Ni
Zn
Pb
Cd
As
AMBI
ns
-
ns
ns
ns
*
-
*
ns
ns
ns
ns
ns
-
-
BPI
ns
-
ns
ns
ns
*
-
**
ns
ns
ns
ns
ns
-
-
BQI
ns
-
*
**
**
**
-
**
ns
**
*
**
ns
-
-
EQR
ns
-
ns
ns
ns
**
-
ns
ns
ns
ns
ns
ns
-
-
H’
ns
-
ns
ns
ns
**
-
**
ns
ns
ns
*
ns
-
-
M-AMBI
ns
-
ns
ns
*
***
-
*
ns
**
*
**
ns
-
-
MC
LOI
TOC
Al
Fe
Mn
V
Cr
Co
Cu
Ni
Zn
Pb
Cd
As
*
-
ns
ns
ns
ns
-
*
*
ns
ns
ns
ns
ns
ns
(d) Masan Bay (n=15)
AMBI
BPI
*
-
ns
ns
*
ns
-
ns
*
ns
ns
ns
ns
ns
ns
BQI
ns
-
ns
ns
ns
ns
-
ns
ns
ns
ns
ns
ns
ns
ns
EQR
ns
-
ns
ns
ns
ns
-
ns
ns
ns
ns
ns
ns
ns
ns
H’
*
-
ns
ns
ns
ns
-
ns
*
ns
ns
ns
ns
ns
ns
M-AMBI
ns
-
ns
ns
ns
ns
-
ns
ns
ns
ns
ns
ns
ns
ns
MC
LOI
TOC
Al
Fe
Mn
V
Cr
Co
Cu
Ni
Zn
Pb
Cd
As
AMBI
ns
-
-
ns
ns
*
-
ns
*
ns
ns
ns
ns
*
ns
BPI
ns
-
-
ns
*
*
-
ns
ns
ns
ns
ns
ns
ns
ns
BQI
**
-
-
ns
ns
***
-
ns
ns
***
ns
**
ns
***
ns
EQR
*
-
-
ns
ns
**
-
ns
ns
ns
ns
ns
ns
***
ns
H’
**
-
-
ns
ns
**
-
*
ns
ns
ns
ns
ns
***
ns
M-AMBI
**
-
-
ns
ns
**
-
ns
ns
*
ns
ns
ns
**
ns
MC
LOI
TOC
Al
Fe
Mn
V
Cr
Co
Cu
Ni
Zn
Pb
Cd
As
AMBI
ns
-
-
ns
ns
ns
-
*
ns
**
*
**
ns
ns
-
BPI
ns
-
-
ns
ns
ns
-
ns
ns
ns
ns
ns
ns
ns
-
BQI
ns
-
-
**
*
ns
-
ns
ns
ns
*
ns
ns
ns
-
EQR
ns
-
-
ns
ns
ns
-
ns
ns
*
ns
*
ns
ns
-
H’
ns
-
-
*
ns
ns
-
ns
ns
*
ns
*
ns
ns
-
M-AMBI
ns
-
-
*
*
ns
-
ns
ns
ns
ns
ns
ns
ns
-
(e) Jinhae Bay (n=62)
(f) Ulsan Bay (n=51)
- : not analyzed.
ns: not significant (p > 0.05).
*: significant (p < 0.05).
**: very significant (p < 0.01).
***: highly significant (p < 0.001).
Fig. S1. Map showing the coastal geography and sampling locations (total n = 365) in six target study areas (a–e, two areas in d
panel); (a) Gyeonggi Bay (n = 78), (b) Yeongsan River Estuary (n = 72), (c) Gwangyang Bay (n = 87), (d) Masan Bay (n = 15) and
Jinhae Bay (n = 62), and (e) Ulsan Bay (n = 51).