New Zealand Journal of Botany
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Molecular evidence of the presence of Dictyota
dichotoma (Dictyotales: Phaeophyceae) in
Argentina based on sequences from mtDNA and
cpDNA and a discussion of its possible origin
Erick Alves Pereira Lopes-Filho, Fabiano Salgueiro, Silvia Mattos Nascimento,
M. Cecilia Gauna, Elisa R. Parodi & Joel Campos De Paula
To cite this article: Erick Alves Pereira Lopes-Filho, Fabiano Salgueiro, Silvia Mattos Nascimento,
M. Cecilia Gauna, Elisa R. Parodi & Joel Campos De Paula (2017) Molecular evidence of the
presence of Dictyota�dichotoma (Dictyotales: Phaeophyceae) in Argentina based on sequences
from mtDNA and cpDNA and a discussion of its possible origin, New Zealand Journal of Botany,
55:3, 293-305, DOI: 10.1080/0028825X.2017.1326387
To link to this article: https://doi.org/10.1080/0028825X.2017.1326387
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NEW ZEALAND JOURNAL OF BOTANY, 2017
VOL. 55, NO. 3, 293–305
https://doi.org/10.1080/0028825X.2017.1326387
RESEARCH ARTICLE
Molecular evidence of the presence of Dictyota dichotoma
(Dictyotales: Phaeophyceae) in Argentina based on sequences
from mtDNA and cpDNA and a discussion of its possible
origin
Erick Alves Pereira Lopes-Filhoa, Fabiano Salgueiroa, Silvia Mattos Nascimentoa,
M. Cecilia Gaunab, Elisa R. Parodib and Joel Campos De Paula a
a
Programa de Pós-Graduação em Biodiversidade Neotropical, Universidade Federal do Estado do Rio de
Janeiro, Rio de Janeiro, Brazil; bCONICET- Instituto Argentino de Oceanografía, Universidad Nacional del Sur,
Bahía Blanca, Argentina
ABSTRACT
ARTICLE HISTORY
Dictyota is a brown algae genus inhabiting tropical to warm
temperate environments where it is an important food source,
shelter and substrate to several species of invertebrates and other
algae. The taxonomy of this genus is troublesome, with poor
species delimitation and doubtful records in the literature.
Dictyota dichotoma, the type species of the genus, was commonly
accepted as a cosmopolitan species because of the inaccurate
geographical distributional range as a consequence of
misidentification in several parts of the world. Recent studies with
molecular data revealed new species and a new understanding of
the evolution and biogeography of the genus Dictyota. These
studies confined natural populations of D. dichotoma to Europe
(Atlantic and Mediterranean coasts) and Macaronesian islands
(Azores, Madeira and Canary archipelagos). Also, they confirmed
its presence in South Africa, but whether the species was native
or introduced in South Africa could not be verified. In the present
study two regions of cpDNA (psbA, rbcL) and one region
of mtDNA (nad1) from Argentinian samples, identified
morphologically as D. dichotoma, were analysed and compared
to other Dictyota species. The identity of these samples as
D. dichotoma was confirmed. A haplotype network analysis using
all available psbA sequences distinguished seven haplotypes
divided into two geographic groups: Atlantic–Mediterranean and
Canarian. In Argentina and South Africa only the most common
haplotype of the Atlantic–Mediterranean group was observed.
According to the paleoceanographic currents and the presence of
a European haplotype, the introduced nature of D. dichotoma is
indicated.
Received 14 February 2017
Accepted 1 May 2017
KEYWORDS
Dictyotaceae; exotic species;
nad1; psbA; rbcL; South
Atlantic Ocean
CONTACT Joel Campos De Paula
depaula.joelc@gmail.com
Supplementary data available online at www.tandfonline.com/10.1080/0028825X.2017.1326387
© 2017 The Royal Society of New Zealand
294
E. A. P. LOPES-FILHO ET AL.
Introduction
Dictyota J.V. Lamouroux is an important component of the marine flora in tropical and
subtropical environments and is commonly found from the lower range of the intertidal
zone to deeper areas (c. 80 m) of the subtidal zone (Littler & Littler 2000; De Clerck et al.
2006; Bittner et al. 2008). The genus has attracted the attention of researchers for several
reasons, including the production of bioactive metabolites (Vallim et al. 2005; De Paula
et al. 2011) and its ecological role, such as the high biomass that may be used as a food
source, shelter and that serves as a substrate to several species of invertebrates and
other algae (Genzano & Rodríguez 1998; Stachowicz & Hay 2000; Gauna et al. 2015;
Moore & Eastman 2015). The identification of Dictyota species may be challenging due
to phenotypic plasticity, simple morphology and poor delineation among species, which
is the reason for the description of hundreds of names for new taxa and doubtful geographical distributional ranges (Schnetter et al. 1987; De Clerck 2003; Tronholm et al.
2010a, 2010b; Gauna et al. 2013). In the southwest Atlantic, the genus Dictyota remains
understudied and the species recorded have never been the subject of a formal review,
although there have been some nomenclatural corrections (Oliveira Filho 1977; Széchy
& De Paula 2016).
Dictyota dichotoma (Hudson) J.V. Lamouroux was described as Ulva dichotoma in
England in 1762 and later it was transferred to Dictyota in 1809 (Lamouroux 1809).
During the 19th and 20th centuries, D. dichotoma was considered to be widely distributed
from tropical to warm temperate areas of the world (Hwang et al. 2005; Tronholm et al.
2008, 2010b) and it was placed in an eurythermic group of species (Van den Hoek 1982).
Tronholm et al. (2010b) reviewed the genus Dictyota for Europe using molecular data
and a large dataset with sequences from several places of the world, and they restricted
the occurrence of D. dichotoma to the northeastern Atlantic (Europe and Africa). The specimens from other oceans, previously identified as D. dichotoma, were assigned to other
species and so this taxon should not be considered as a cosmopolitan species. So, the
native range of D. dichotoma on the European Atlantic coasts was established, from Scotland
and southern Norway to Portugal, the Mediterranean Sea and most of the Macaronesian
islands, except for the tropical Cape Verde where it was not found (Van den Hoek 1982;
Schnetter et al. 1987; Tronholm et al. 2010b). Despite the occurrence of D. dichotoma in
South Africa there had been questioned by De Clerck (2003), Tronholm et al. (2010b) confirmed its presence using a psbA marker. This intriguing record could not be attributed to
natural or introduced origin by these authors.
On the Atlantic coast of South America there are many records of misidentification of
species of Dictyota as D. dichotoma in earlier phycological studies (Dunal 1833; Martius
et al. 1833; Saint-Hilaire 1833; Montagne 1839). Recently, D. dichotoma has been considered as a cryptogenic species in Argentina (Raffo et al. 2014; Schwindt et al. 2014;
Gauna et al. 2015).
Exotic species are one of the major threats to biodiversity and one of the major concerns
throughout the oceans (Schwindt et al. 2014; Abreu et al. 2016). Invasion of marine
macroalgae have been reported around the world in recent decades, such as Undaria pinnatifida (Harvey) Suringar, Sargassum muticum (Yendo) Fensholt, Codium fragile ssp.
fragile (Suringar) Hariot, Caulerpa taxifolia (M. Vahl) C. Agardh and Schizymenia
dubyi (Chauvin ex Duby) J. Agardh (Casas et al. 2004, 2008; Raffo et al. 2009; Irigoyen
NEW ZEALAND JOURNAL OF BOTANY
295
et al. 2011; Ramírez et al. 2012). Recently, Schwindt et al. (2014) sampled six of the 10
main marine ports in Argentina and found the presence of 32 non-indigenous taxa,
including exotic and cryptogenic taxa.
This study aims to confirm the molecular identity of specimens previously identified as
Dictyota dichotoma from Argentina and discuss the possible origin of the South Atlantic
populations.
Materials and methods
Dictyota specimens were collected from Las Grutas, San Matías Gulf (40°48′ S, 64°48′ W) in
2014 from a population previously studied by Gauna et al. (2013, 2015) with respect to the
morphology of the specimens, phenology and ecology (epiphytic communities). The algae
were collected by SCUBA diving from the subtidal zone and then screened in the field to
remove possible epiphytes. Each individual was separated into two subsamples, one of
them was preserved in silica gel for molecular studies and the other was preserved in
4% formalin solution, and deposited at the Herbarium of Universidad Nacional del Sur
(BBB; Bahia Blanca, Argentina).
DNA was extracted using HiPurA Plant Genomic DNA Miniprep Purification Kit
(MolBio HIMEDIA). The plastid-encoded PSII reaction centre D1 (psbA), NADH dehydrogenase subunit 1 (nad1) and Rubisco large subunit (rbcL) were amplified via polymerase chain reaction (PCR) utilising the primers from Tronholm et al. (2010b) and Bittner
et al. (2008), and then sequenced by Macrogen Inc. Korea.
The sequences were edited on Mega 6.0 (Tamura et al. 2013) and then analysed with
others retrieved from GenBank (www.ncbi.nlm.nih.gov/genbank) (Table S1). Three datasets were generated with alignments of 695 bp for nad1, 775 bp for psbA and 1149 bp for
rbcL. The phylogenetic reconstructions were performed for each gene separately. The concatenation would not be reliable in this case because sequences available on GenBank are
from distinct vouchers and from different locations.
The evolution model of GTR + I + G was obtained by jModelTest 2.14 for each marker
(Darriba et al. 2012) and used in the Bayesian Inference (BI) analysis on MrBayes 3.1.2
(Ronquist et al. 2012). For nad1 and psbA, BI was carried out with 1 million generations
in 2 runs and 4 chains, sampling every 1000th generation, discarding the first 30 and 50
trees for nad1 and psbA, respectively. For rbcL, BI was carried out with 2 million generations in 2 runs and 4 chains, sampling every 1000th generation, discarding the first 50
trees. The maximum likelihood (ML) analysis was performed on Mega 6.0, using the
GTR + I + G model with bootstrap of 1000 replications.
The gene with a higher number of Dictyota dichotoma sequences available from
GenBank was psbA and therefore it was used to build a haplotype network with Dnasp
v.5 (Librado & Rozas 2009) and Network v.5 by median joining. The initial alignment
used the 220 available sequences (Table S2). Then, the shorter sequences and those
with many missing data were removed from the analysis, leaving 149 sequences. To
account for the disparity in the number of sequences available from different geographic
regions/localities, up to 10 sequences/haplotypes per population were used in the analysis,
with sequences retrieved from samples collected from up to 100 km apart considered as
part of the same population. The final dataset used in the haplotype network analysis
included 68 sequences with 638 bp (Table S2).
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E. A. P. LOPES-FILHO ET AL.
Results
The topology of the trees for psbA, rbcL and nad1 obtained in the present study agreed
with previous studies (Tronholm et al. 2010a, 2010b). The samples from Argentina
formed a clade with genuine European sequences of D. dichotoma. For psbA the clade
with sequences from Argentina and from the neotype elected by Tronholm et al.
(2010b) obtained bootstrap values of 100% (ML) and 1.00 (BI) (Figure 1). For rbcL
(Figure S1) high values of bootstrap and posterior probability were obtained for the
clade with sequences from Argentina and Ireland. The same high values were observed
for nad1 (Figure S2) for the clade with sequences from Argentina and France.
The haplotype network (Figure 2) revealed seven haplotypes in the northeast Atlantic
Ocean that are geographically divided into two groups: Atlantic–Mediterranean and
Canarian. The Atlantic–Mediterranean group consisted of two haplotypes, with H1
being the most widespread and present on the Atlantic coasts of the Iberian Peninsula,
Figure 1. Phylogenetic tree based on psbA sequences, presenting a consensus topology estimated by
Maximum Likelihood (ML) and Bayesian Inference (BI) analyses. The numbers associated with each
branch represent the statistical support values (only values above 95% are shown), where the first is
the bootstrap values from ML and the second is the posterior probability from BI.
NEW ZEALAND JOURNAL OF BOTANY
297
Figure 2. Haplotype diversity of psbA from Dictyota dichotoma. The red dots are the locations where
the sequences of D. dichotoma on GenBank come from. a, Haplotype network of psbA showing the two
groups: Atlantic–Mediterranean and Canarian; b, distribution of the seven haplotypes in the North
Atlantic population; c, South Atlantic populations with the single haplotype H1.
France, the British Islands and the North Sea, the entire Mediterranean Sea and parts of
the Macaronesian islands (Azores and Madeira archipelagos). The second haplotype (H2)
seems to be less frequent in general and was only detected in the Gulf of Lion (France), in
the Mediterranean Sea. Samples from Argentina and South Africa corresponded to the H1
haplotype. The Canarian group consisted of five haplotypes (H3, H4, H5, H6 and H7) that
are almost restricted to Macaronesia (Canary and Madeira islands), where H5 is the most
common one, widely found throughout these islands. The H3 haplotype from the Canarian group is the only one that was detected away from these islands in the Gulf of Lion.
Discussion
The higher haplotype diversity observed for D. dichotoma in the northeastern Atlantic
(Figure 2) is consistent with the hypothesis presented by Tronholm et al. (2010b) explaining the low diversity of the genus Dictyota in Europe. This hypothesis states that, following
the desiccation of the Mediterranean Sea which caused the extinction of most of the
marine biota during the Messinian salinity crisis (6.8–5.3 Ma), the Mediterranean Sea
was recolonised by Atlantic species from adjacent areas, such as the Macaronesian
islands and the northwestern African coast, when it was re-flooded (Coll et al. 2010; Tronholm et al. 2010b). The results from the present study demonstrate that European Atlantic
and Macaronesian populations of D. dichotoma were probably separated during this vicariant event and, later, northern populations (haplotype H1) were successful in recolonising
the Mediterranean Sea and subsequently reached Macaronesia (Azores and Madeira
298
E. A. P. LOPES-FILHO ET AL.
archipelagos). Despite having a greater diversity, the Canarian group remained restricted
to Macaronesia with the only exception being haplotype H3, in contrast to what seems to
have happened with other Dictyota species from Macaronesia that were able to recolonise
the Mediterranean Sea (Tronholm et al. 2010b). However, the presence of the H1 haplotype in the South Atlantic would contradict this scenario.
The results of Tronholm et al. (2012), using the relaxed molecular clock for the genus,
revealed D. dichotoma as the only extant species of one of the oldest lineages in the genus,
which split early from the others c. 44.37 Ma (53–34 Ma), and being one of the first clades
to disperse through the Tethys Seaway to the westernmost part of the Tethys realm where
it most likely evolved and later dispersed to the Atlantic coast of Europe and Macaronesia.
Since the opening of the South Atlantic (100–80 Ma) the northward paleocurrents along
the African coast allowed the water transport of the Tethys Sea to the Atlantic via Southern
Africa while most of the transport continued on account of the circum-equatorial circulation directly to the North Atlantic until 12–18 Ma (Stille 1992; Stille et al. 1996; Cowman &
Bellwood 2013), when the circulation in the North Atlantic was governed by the Pacific–
North Atlantic current (Iturralde-Vinent 2006). Therefore, the colonisation of the South
Atlantic coast of Africa by D. dichotoma would have been prevented because it would have
been against the direction of the ocean currents.
Furthermore, there was no connection between the westernmost part of the Tethys
realm and South America, thereby a warm paleocurrent (probably originating in the Caribbean) crossed the Atlantic coast of South America to Patagonia and Tierra del Fuego,
where the marine communities were tropical until middle–late Miocene (Del Río
2004a, 2004b; Le Roux 2012). The hypotheses of trans-oceanic dispersal in this scenario
fail mainly due to biology of D. dichotoma demonstrated by culture experiments in
which this species does not possess affinities to tropical conditions (Biebl 1959; Bogaert
et al. 2016) which would be required for it to be successfully dispersed along the South
American coast up until the late Miocene. The adequate temperate marine conditions
for D. dichotoma in the southwestern Atlantic were only established after the complete
development of the Circumpolar Antarctic Current, which led to the full operation of
the Malvinas/Falklands Current and the establishment of the Benguela Upwelling
System in the middle–late Miocene (10–9 Ma). As a consequence, there was a decrease
in the seawater temperature in Patagonia and along the southwestern African coast (Heinrich et al. 2011; Rommerskirchen et al. 2011; Le Roux 2012), the extinction of the Patagonian tropical marine communities and the retraction of the warm Brazilian current to the
north of Argentina/Uruguay (Del Río 2004a, 2004b). Therefore, it is difficult to explain
how D. dichotoma would have reached the coast of Argentina through natural dispersion.
Those facts agree with the current data that do not show any exclusive haplotypes for
the South Atlantic populations (Argentina and South Africa) of D. dichotoma, which
would be expected in the case of an old dispersal from the northeastern Atlantic (over
10 Ma), or any haplotype shared with the Canarian group, which would be expected in
the case of a recent dispersal (less than 6 Ma) and so, against the direction of the ocean
currents. The occurrence of the H1 haplotype in the South Atlantic Ocean is inconsistent
with the hypothesis of natural dispersal with subsequent genetic differentiation and supports the hypothesis of human-mediated introduction, where propagules of D. dichotoma
settled successfully in Argentina and in South Africa because both areas belong to temperate provinces, similar to its native area in the northeastern Atlantic (Spalding et al. 2007).
NEW ZEALAND JOURNAL OF BOTANY
299
The first evidence of the presence of D. dichotoma in Argentina based on chemosystematics, rather than just morphology, is presented by Palermo et al. (1994) who studied a
population from Nuevo Gulf and identified three prenylated diterpenes expected to occur
(and its precursors) in this species (Amico et al. 1976; Fattorusso et al. 1976; Faulkner et al.
1977; Siamopoulou et al. 2004; Vallim et al. 2005). The locations where D. dichotoma was
collected by Palermo et al. (1994) and for this study are near to two of the six main marine
ports studied by Schwindt et al. (2014). These authors demonstrated that the collection
areas are in natural bays with anthropic influences (but with abiotic conditions adequate
for D. dichotoma, such as salinity and surface water temperature) and have high maritime
activities, which enable the high percentage of non-indigenous marine taxa found in them.
Port areas provide artificial structures that favour the introduction of exotic fouling/
benthic species (recruitment, survival and dispersal) which are mainly transported by
ballast water (Schwindt et al. 2014; Abreu et al. 2016; Lin & Zhan 2016). In South
Africa, most of the introduced species reported in both the cool and warm temperate provinces are from the Northern Hemisphere (65%). At the Agulhas ecoregion, where the
presence of D. dichotoma was confirmed (Tronholm et al. 2010b), 73 non-indigenous
(alien, invasive or cryptogenic) taxa have been reported (Mead et al. 2011; Robinson 2015).
Introduction of exotic species may be overlooked for decades (Abreu et al. 2016),
especially when a group (such as Dictyota) has not been formally revised. It is not clear
at present how D. dichotoma has affected the marine species in Argentina, especially on
the northern parts of the Patagonian coast where the genus Dictyota (reported as
D. dichotoma) is abundant (Casas et al. 2004; Gauna et al. 2015). For example, in the
Gulf of San José and nearby areas (e.g. Nuevo Gulf and San Matias Gulf) D. dichotoma
may cover up to 30% of the entire area at depths up to 10 m (Boraso de Zaixso &
Zaixso 2007; A. Boraso, pers. comm., 2016).
In the same way, the impact on native Dictyota species could not be estimated. Using
the ecoregions proposed by Spalding et al. (2007), the known distribution of the genus
Dictyota in Argentina (Figure S3) covers the final part of the Warm Temperate Southwestern Atlantic province and the Atlantic part of the Magallanic province. The persistent misidentification for almost two centuries (since Montagne 1839) resulted in
D. dichotoma being considered as the only species in Argentina, and the reports of
other species such as Canistrocarpus cervicornis (Kützing) De Paula & De Clerck (as Dictyota cervicornis Kützing), D. divaricata J.V. Lamouroux and D. dichotoma var. intricata
(C.Agardh) Greville (Taylor 1939; Asensi 1966; Van den Hoek 1982; Boraso de Zaixso
1995; Mendoza & Nizovoy 2000; Piriz et al. 2003; Croce et al. 2015) were considered
as representing a wide morphological variation of it (Boraso de Zaixso 2012). Although
the genus has also been found in the Beagle Channel (A. Boraso, pers. comm., 2016),
Mystikou et al. (2016) published the southernmost records of Dictyota in the southwestern
Atlantic. Their molecular data confirmed that the species is distinct from D. dichotoma (as
also verified in Figure 1), which is the first step towards uncovering the diversity of the genus
in Argentina.
The spread of D. dichotoma northward along the southwestern Atlantic from the
Argentine populations is unexpected because of: 1. the Confluence Zone of the southward
warm Brazilian current and northward cold Malvinas/Falklands current—which spans
from about 25°S to 45°S—where the water masses are reflected eastward as a South Atlantic
current, approximate average axis at 39°S (Bisbal 1995); and 2. the La Plata river (at 35°S),
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E. A. P. LOPES-FILHO ET AL.
which results in brackish and turbid water, as well as the lack of a suitable substrate that
prevents the occurrence of seagrass and marine benthic macroalgae in the La Plata
estuary region, and there is a depauperate flora on the Argentinian, Uruguayan and Brazilian coasts under its influence (Coll & Oliveira 1999; Calliari et al. 2003; Acha et al. 2008;
Braga et al. 2008; Campos et al. 2008). Additionally, the only Uruguayan record of Dictyota (as D. dichotoma) was questioned by Coll & Oliveira (1999) because no specimens
were found in any of the mentioned herbaria in the original study and no other specimens
have been collected subsequently. Therefore, Dictyota species are separated by more than
1200 km between Mar del Plata (Argentina) and Torres (Brazil) due to the lack of hard
substrate (Baptista 1977; Oliveira Filho 1977).
In the southeastern Brazil ecoregion, which includes two important Brazilian harbours,
there are seasonal coastal upwelling events and the cold (<18 °C) water masses can reside
throughout the year in a deep benthic system (Coelho-Souza et al. 2012). These waters
could sustain organisms with cold waters affinities, such as the brown alga Laminaria
abyssalis Joly and Oliveira, which occurs below 50 m (Guimarães et al. 1986). Moreover,
the intertidal Jolyna laminarioides Guimarães and Elachistiella leptonematoides Cassano,
Yoneshigue-Valentin and Wynne (Valentin 2001; Cassano et al. 2004) only occur
during the upwelling period. This can promote a temporary niche for the introduction
of species with cold water affinities. There is no evidence, so far, of the presence of
D. dichotoma and most of the morphologically similar specimens are D. menstrualis
(Hoyt) Schnetter, Hörning and Weber-Peukert (unpubl. data). Recent reports of
D. dichotoma and D. dichotoma var. intricata by Villaça et al. (2010) and Crespo et al.
(2014) are due to the citation of old studies.
In conclusion, the natural dispersal of the species from the northeast Atlantic to Argentina and South Africa would be unlikely, as this temperate species would have to cross the
whole equatorial and tropical Atlantic Ocean against the direction of the currents. The
occurrence of a single, and the most common, haplotype of the Atlantic–Mediterranean
group in the South Atlantic populations, suggests that D. dichotoma was introduced.
The human-assisted introduction of other taxa of Dictyotaceae has already been reported
elsewhere, such as the cases of Rugulopteryx okamurae (E.Y. Dawson) I.K. Hwang, W.J.
Lee and H.S. Kim (Verlaque et al. 2009), Dictyota cyanoloma Tronholm, De Clerck,
A. Gómez-Garreta and Rull Lluc (Tronholm et al. 2010b; García et al. 2016) and Dictyota
furcellata (C.Agardh) Greville (Nelson & Wilcox 2010). Future studies to include more
comprehensive sampling are necessary and may reveal whether the introduction of
D. dichotoma has occurred once or multiple times, its actual geographical range in Argentina and how it has affected the benthic marine community.
Acknowledgements
We would like to thank Dr Alicia Boraso for her valuable information and Clariana Ferraz Sampaio
for proof reading the English version. Also, the two anonymous referees for suggestions that
improved the manuscript. Associate Editor: Dr Roberta D’Archino.
Disclosure statement
No potential conflict of interest was reported by the authors.
NEW ZEALAND JOURNAL OF BOTANY
301
Funding
This work was supported by Fundação Carlos Chagas Filho de Amparo à Pesquisa do Estado do Rio
de Janeiro (FAPERJ E-26/111/397/2012) and by the scholarships received by EAPLF during his
final year in college (UNIRIO) and during his Master’s Programme (Coordenação de Aperfeiçoamento de Pessoal de Nível Superior - CAPES).
ORCID
Joel Campos De Paula
http://orcid.org/0000-0001-5852-7516
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